Gene Information

Name : HCW_04705 (HCW_04705)
Accession : YP_006222838.1
Strain : Helicobacter cetorum MIT 00-7128
Genome accession: NC_017737
Putative virulence/resistance : Virulence
Product : UTP--glucose-1-phosphate uridylyltransferase subunit GalU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1015971 - 1016792 bp
Length : 822 bp
Strand : -
Note : COG1210 UDP-glucose pyrophosphorylase

DNA sequence :
ATGATTAAAAAATGTCTTTTTCCTGCTGCTGGTTATGGCACACGCTTTTTACCCATTACTAAAACTATCCCCAAAGAAAT
GCTCCCCATTATAGACAAACCCCTAATGCAATATGCTGTAGAAGAGGCTATGGAGGCAGGTTGTGAGGTAATGGCAATTG
TTACAGGACGAGGCAAACGCAGTTTGGAAGACTATTTTGATACAAGCTATGAGTTAGAACATCAAATCCAAGGCACAAGC
AAGGAAAATGCCCTAGAAAGCATTCGTAATATTATGAAAAAATGCCGTTTTTCTTATACACGCCAAAAGCAAATGAAAGG
TCTAGGGCATGCGATTTTAACCGGTGAAACCCTCATAGGCAATGAGCCTTTTGCAGTGATTTTAGCCGATGATTTATGTG
CTAGTCATAGTAATCCTGCTGTTTTAAAACAAATGAGCGAACTTTATAAAAAATATCAATGCTCTATTGTGGCTATTGAA
GAAGTAGCGTTAGAAGAGGTTTCAAAATACGGCGTGATTAAGGGCGAATTACTAGAAGAAGGCGTGTATGAGATAAAAGA
TATGGTTGAAAAACCTAACCAAGAAGATGCCCCAAGCAATTTAGCTGTCATAGGACGCTATATTCTAACCCCTGATATTT
TTGATATTTTGCGTATTACTAAACCCGGCAAAAATAATGAAATCCAAATTACAGACGCTCTTTTAACTCAAGCTAAACAA
AAACGCATTATTGCCTATAAATTCAAAGGTAAGCGTTATGATTGTGGGAGTGTTGAGGGCTATATTGAGGCAACTAATGC
CTATTATCAACAACGCTTATAA

Protein sequence :
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIIDKPLMQYAVEEAMEAGCEVMAIVTGRGKRSLEDYFDTSYELEHQIQGTS
KENALESIRNIMKKCRFSYTRQKQMKGLGHAILTGETLIGNEPFAVILADDLCASHSNPAVLKQMSELYKKYQCSIVAIE
EVALEEVSKYGVIKGELLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFDILRITKPGKNNEIQITDALLTQAKQ
KRIIAYKFKGKRYDCGSVEGYIEATNAYYQQRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 5e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCW_04705 YP_006222838.1 UTP--glucose-1-phosphate uridylyltransferase subunit GalU VFG0964 Protein 8e-54 46