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Name : HCW_04385 (HCW_04385) Accession : YP_006222776.1 Strain : Helicobacter cetorum MIT 00-7128 Genome accession: NC_017737 Putative virulence/resistance : Virulence Product : VirB9 type IV secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 943852 - 945342 bp Length : 1491 bp Strand : - Note : COG3504 Type IV secretory pathway, VirB9 components DNA sequence : ATGAACTTGAAAACCTATTCTATAGCTTTCTTATTCCTTGCTTTAAACGCAAATGAACCTAATAATACCTTAGAGCAACC AAATACGCCCACTACATTTCCTAGTAGCCCTAGTTCTGAACCTAATAATTTACCAAATCCTATGCGTAATACCACGCCTT CACCTAATGTCTTTGATAGCTCTTCTCAACAAGCCCCTATACCAAATGATGATAGCGTTAAAGCATTAAGTGCAAGTGGC ATTGATGAAAACAAGTTCAAAGAAGATGAAGACATAGAGCAAGCTAAAAAAATGATGGATTTGCATGCTATCCAAAATTC ATTTTTTGACAAAGACAGACTTTTACAAGACAATCATTTAAACATTCTTTATAACGCAGGGGATACTTATAGAATTAGAT TAAGATATGCTATGACAACCACTTTCATCTTTGATGAAGATAACATCATTTATGTGAGCTTAGGAGATCCCACAGGATTT GAAGTCTCTTATCCTAACAATGAGCAATACGCTCTCAATAATGTTTTAATCATCAAGCCTTTGCTTATTGGAGTAGATAG CAATTTAACTGTGATTGGCTCTAGCGGTAAGGTTTATACTTTTTACATCTTTTCTACCACTTTTACAAGCAAAAAGAACC CCCTATTAAGCGTATTTGTATCTAGCAATAGAAAAATAGGCACTATTGATGTAGGCGATAAAAACAAGAAAAAAGAAAAA GAAAGTGGCATTAAAACCAACACTCTTTTTACTAATGATAGTTTTAAAAAGATTGATTATTCTAGCAAGGAAATTGATGA TGGCAAGTTCATTAAAATTGGCGATGAAGTCAATCATATCTATATAGAAAAATCAAAAATTAGTCGTGGCTATATCCAAA AGCCTAAAAGCAAACGAACTTGGTGGAGTTTATGGTTTTATAAACGCCCTTTAAAACCTAGCAAGGATATTCAAGCCTTT GAGATTTTTGATGATGGTAAATACACTTATTTTAAATTCAATAGGGATTTGTCCGTCTTTAAATTCCCCTATCCTTATAA AGTAGTGGATAAATATGATAGCCCTATCAATTCTAAAATTGTTGGTAATTACATTATTGCTGAAGATGTGAGTGATAAAT GGACGCTAAGACTTGGAGATGAATATGTTTGTGTGCATAAACTCAAATACGAACAATACATTAAATATCTCAAATCTAAT TTACGCACGCAACAAAGACTAGACAACAAAGACTTCCTTTCTCAAATTCCCCAAGTCAATCCTAAACTAGAAAGACAAAA GGAAGTTCAAAAAATCAAAGATTATGTGTCCAATCCCAAACCTAAAATCACTAAACAAATAGAAAAACCTACCCAAAAAA CGCTTTATAAGACTAAAAAAGGTATCAAGCACTGCCCCACACTATGCCCACCTATTGAAAAGAAAAAAACTATTCAAGAA AAAAATAACCCTTCAAAAACTAATCCACTTAAAACAAAGGCAAAACAATGA Protein sequence : MNLKTYSIAFLFLALNANEPNNTLEQPNTPTTFPSSPSSEPNNLPNPMRNTTPSPNVFDSSSQQAPIPNDDSVKALSASG IDENKFKEDEDIEQAKKMMDLHAIQNSFFDKDRLLQDNHLNILYNAGDTYRIRLRYAMTTTFIFDEDNIIYVSLGDPTGF EVSYPNNEQYALNNVLIIKPLLIGVDSNLTVIGSSGKVYTFYIFSTTFTSKKNPLLSVFVSSNRKIGTIDVGDKNKKKEK ESGIKTNTLFTNDSFKKIDYSSKEIDDGKFIKIGDEVNHIYIEKSKISRGYIQKPKSKRTWWSLWFYKRPLKPSKDIQAF EIFDDGKYTYFKFNRDLSVFKFPYPYKVVDKYDSPINSKIVGNYIIAEDVSDKWTLRLGDEYVCVHKLKYEQYIKYLKSN LRTQQRLDNKDFLSQIPQVNPKLERQKEVQKIKDYVSNPKPKITKQIEKPTQKTLYKTKKGIKHCPTLCPPIEKKKTIQE KNNPSKTNPLKTKAKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 6e-90 | 55 |
