Gene Information

Name : HCW_04370 (HCW_04370)
Accession : YP_006222773.1
Strain : Helicobacter cetorum MIT 00-7128
Genome accession: NC_017737
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB11
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 941356 - 942297 bp
Length : 942 bp
Strand : -
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGGCAATTTCAGCAATCTTAGAGGTTCTAATTTCTAAGTTAAGACCCTATTTAGAACTAGACATCAATGAGATAATTTT
TAATGAACCCTACAAGTTTTATCTTGTTAGGGGTTCTAGTTATGAATTGCTTGAAAACAAAGCCTTTGATGAGAAATTTT
TAATGAATTTTTGCGAACAATTAGCTACACATAGGAATTTATTCTTTAATCACAACTTCCCTCATTTAGCCTGTTCTATC
CCTTTTACACGATATAGGGTCAATGCCTTGCACCCAAGCGTTACAGCCAATAATAGCATTTCTATTTGTATTCGTGTGCC
AAGCAATTTTAAGTTTAAAATCAATGCGTTTGTTTTAGGGCAAAAATGCCAAGAAAAAGGGATTGATTACGCCTTTATTT
TAAACTTAGTGAGACTTGGTAAAAATATTTTAGTGAGTGGTGGCACAGCTAGTGGTAAGACAAGCTTTGTAAATAGCTTG
ATTGAAGAAATCCCTATTACTCAAAGAGTTATCACCGTTGAAGATAGTCCAGAATTACACCTAGAAAATCCTAATCAAGT
CAATGTTGTAGTGGGTAAAAATGAAGATTCTAATTTTACCTATGAAAACGCCCTAAACTCTGCTATGAGAATGAGTCCTG
AAAGAGTGCTATTAGGCGAGATTGATACAAGAAATACCGCACTCTTTTTAAGGCTTTCAAACACTGGTCATAGTGGAATG
ATAAGCACCTTACACGCCAATAGCGTTGCAGAAGCCTTTAATGCCATTGGCATGAATGTCAAAATGAATGCTGGTAAGGA
TATTGACACTAGCACACTTTTAGATTTTTTCATTGCTGGAATGGATTTTATTATCCAAATTGTTAAAAAGGGAAATGAAA
GAATTATTGAAGATGTCTTAGATGTTAAAAAGGAATTGAGACTTGCTCTCAATAGGGAATAA

Protein sequence : 
MAISAILEVLISKLRPYLELDINEIIFNEPYKFYLVRGSSYELLENKAFDEKFLMNFCEQLATHRNLFFNHNFPHLACSI
PFTRYRVNALHPSVTANNSISICIRVPSNFKFKINAFVLGQKCQEKGIDYAFILNLVRLGKNILVSGGTASGKTSFVNSL
IEEIPITQRVITVEDSPELHLENPNQVNVVVGKNEDSNFTYENALNSAMRMSPERVLLGEIDTRNTALFLRLSNTGHSGM
ISTLHANSVAEAFNAIGMNVKMNAGKDIDTSTLLDFFIAGMDFIIQIVKKGNERIIEDVLDVKKELRLALNRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 8e-75 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCW_04370 YP_006222773.1 type IV secretion system protein VirB11 VFG1979 Protein 2e-60 44