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Name : HCW_04065 (HCW_04065) Accession : YP_006222716.1 Strain : Helicobacter cetorum MIT 00-7128 Genome accession: NC_017737 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 867019 - 868506 bp Length : 1488 bp Strand : + Note : COG0753 Catalase DNA sequence : ATGACTCACAAAGATTTCAAACAAACTAGCCCTTTTGGTGCTCCAATTGGCGATGATAACAATGTATTTACGGCTGGTCC TAGAGGTCCTGTTCTTTTACAAAGCACTTGGTTTTTAGAAAAATTAGCGGCTTTTGATAGAGAGAGAATCCCAGAAAGAG TGGTGCATGCCAAAGGAAGTGGCGCTTATGGCACATTCACAGTAACTAAAGATATTACCAAATACACTAAAGCAAAGATT TTTTCTAAAGTAGGCAAGAAAACTGAATGCTTTTTTAGATTTTCTACCGTAGCTGGTGAGAGAGGAAGTGCGGATGCTGT AAGAGACCCTAGAGGTTTTGCAATGAAGTATTATACTGAAGAGGGTAACTGGGATTTAGTAGGAAATAACACGCCAATCT TTTTTATCCGTGATGCAATTAAATTCCCTGATTTTATCCACACTCAAAAGAGAGACCCTCAAACTAACTTGCCTAATGGC ACTATGGTATGGGATTTTTGGAGCAATGTGCCTGAGAGCTTACACCAAGTAACATGGCTTATGGGTGATAGAGGTATTCC TAAGACTTTCCGTCATATGGATGGTTTTGGTAGCCATACTTTTAGCCTAATTAATGCGAAAAATGAGCGCTTTTGGGTGA AGTTCCACTTTAAAACCATGCAAGGCATTAAATGCCTAACTAGCGAAGAGGCAGCTAAAATCAGAATGCATGATATGGAT TCGCACCAACGAGATTTATTTGAGGCGATTGAGAGAAAAGAGTTTCCTAAATGGCGCATGAGCATTCAAGTAATGCCAGA AGCAGATGCCAAAAAATATCGTTTCCACCCATTTGATGTTACTAAGACTTGGAGTCAAAAGGATTATCCATTAATGGAAG TGGGCATTGTAGAGTTAAACAAAAATCCAGAAAACTACTTCGCTGAAGTAGAGCAAGCAGCGTTTAACCCCGCTAATATT GTTCCCGGAATTGGTTATAGTCCAGATAGAATGCTACAAGGACGCTTATTTTCTTATGGAGATACCCAACGCTATCGCTT AGGAATCAACCATTCTCAATTACCGGTTAATAAGCCTCGCTGTCCATTCCACTCTACCACTAGAGATGGCTTTATGCAAA ATGGTCATTATGGCTCTTTGAAAAACTATACTCCTAGCTCACTACCGGGTTATAAGGAAGATAAGAATGCTAGAGAGCCT AAGCTCAACTTAAGCTATCTTGAAAAAGAGTATGAAGTATGGAATTGGGATTATAGAGCTGAAGATAGCGACTATTATAC CCAAGCAGGTGATTTATATCGCTTGATGAAAGCTGATGAAAAAGAAAGATTGTATAACAATATTGCGGGTTCTATGATGG GTGTTCCTAAAGAAATTATTGAAAAACAAATGGAGCATTTCAAAAAAGCTGACCCAGCTTATGCAGAAGGCGTTAAAAAA GCCCTTGAAAAGCATGCAAAAATGATGAAAGACATGAAAAAAATGTAA Protein sequence : MTHKDFKQTSPFGAPIGDDNNVFTAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPIFFIRDAIKFPDFIHTQKRDPQTNLPNG TMVWDFWSNVPESLHQVTWLMGDRGIPKTFRHMDGFGSHTFSLINAKNERFWVKFHFKTMQGIKCLTSEEAAKIRMHDMD SHQRDLFEAIERKEFPKWRMSIQVMPEADAKKYRFHPFDVTKTWSQKDYPLMEVGIVELNKNPENYFAEVEQAAFNPANI VPGIGYSPDRMLQGRLFSYGDTQRYRLGINHSQLPVNKPRCPFHSTTRDGFMQNGHYGSLKNYTPSSLPGYKEDKNAREP KLNLSYLEKEYEVWNWDYRAEDSDYYTQAGDLYRLMKADEKERLYNNIAGSMMGVPKEIIEKQMEHFKKADPAYAEGVKK ALEKHAKMMKDMKKM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-141 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 4e-97 | 49 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 4e-94 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 4e-94 | 47 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 4e-94 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 4e-94 | 47 |
