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Name : HCW_00170 (HCW_00170) Accession : YP_006221963.1 Strain : Helicobacter cetorum MIT 00-7128 Genome accession: NC_017737 Putative virulence/resistance : Virulence Product : ComB3 protein Function : - COG functional category : - COG ID : - EC number : - Position : 32187 - 33320 bp Length : 1134 bp Strand : - Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAATAAATGGCTTAAAGGGGTGCTTATTTTTTTAGGGGGTTTTGTAGTGATTATGGCTACTTCTTTAATCTATCATAA AAAGCCAAAAGCCCCCTTAAATAATCAGCCAAATCTTTTAAGTGATGATGAGGTGAAATACCCCCTACAAGACTATATTT TCGCTCAAAATTCAAACCAAAACAATGAGAATAACTCCAAAGACGCTACCATAAAAGCCTTACAACAACAATTAGAAGTC GCTCTAAAAACTTTAAACTCTCAAAAAATCAGCCCCCCTAAACAAGAAATCCCAAAAGATTTCACAAAGCCTCCTACAAA GACAAATTACTCTAAAAAAGACCTTTCTTTAGAGCAATTAGATTTATTAGCCACTCGTATAACCCCCTTTGAAGAAAGCC CTAAAAACTATGAAGAAAACCTTATTTTTCCTACAGATTCTTCTAAAGGCATAGATAGTTTCACTAATTTGAAAGAAAAA GACATAACCACGAATGAAAACAGGCTTTTAAGAACCATTACAGCGGATAAAATGATACCAGCCTTTTTAATCACGCCCAT TTCTAGTCAAATCGCTGGTAAAGTCATCGCCCAAGTAGAGAGCGATATTTTTGCAAACATGGGAAAGGCTGTTTTAATTC CTAAAGGTTCTAAAGTCATAGGCTACTACAATAACAATAACAAAATGGGGGAGTATCGCCTAGATATTGTATGGACTAGA ATTATCACACCCCATGGCATAAATATCATGCTCACTAACGCTAAAGGAGCGGATATTAAGGGCTATAATGGCTTAGTAGG CGAACTCATTGAAAGGAATTTCCAACGCTATGGCATGCCCTTACTTCTTTCTACGCTCACTAATGGCTTATTGATAGGCT TAACTTCCGCTTTAAACAATAAGGGCAATAAAGAAGACACAACGAATTTCTTTGGGGATTATCTCCTAATGCAAATGATA AGACAAAGTGGCACAGGTATCAATCAAGTGATTAATCAAATTTTAAGAGATAAGAGCAAAATCGCCCCCATTGTAGTGAT TAGAGAAGGGAGTAGAGTATTTATCTCGCCAAATACGGACATCTTTTTTCCTATGCCAAAAAGTAATGAAGTCATCGCTG AGTTTTTGGAGTAG Protein sequence : MNKWLKGVLIFLGGFVVIMATSLIYHKKPKAPLNNQPNLLSDDEVKYPLQDYIFAQNSNQNNENNSKDATIKALQQQLEV ALKTLNSQKISPPKQEIPKDFTKPPTKTNYSKKDLSLEQLDLLATRITPFEESPKNYEENLIFPTDSSKGIDSFTNLKEK DITTNENRLLRTITADKMIPAFLITPISSQIAGKVIAQVESDIFANMGKAVLIPKGSKVIGYYNNNNKMGEYRLDIVWTR IITPHGINIMLTNAKGADIKGYNGLVGELIERNFQRYGMPLLLSTLTNGLLIGLTSALNNKGNKEDTTNFFGDYLLMQMI RQSGTGINQVINQILRDKSKIAPIVVIREGSRVFISPNTDIFFPMPKSNEVIAEFLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB10-1 | YP_002301098.1 | VirB10 type IV secretion protein | Virulence | cag PAI | Protein | 3e-65 | 53 |
