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Name : HCW_08255 (HCW_08255) Accession : YP_006223538.1 Strain : Helicobacter cetorum MIT 00-7128 Genome accession: NC_017737 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : - COG ID : - EC number : - Position : 1816917 - 1817984 bp Length : 1068 bp Strand : - Note : COG0582 Integrase DNA sequence : ATGCTAACAAACAAACTCACTAAATCTCAAAGAGAACTCTTTGATAACATTAAAGCCTTTTTGGTTGCTAAGGTTAAAAA TTTCACACCCATTCAAGATGTGAATGATATGGCTTTGATATTAGATATACAAAACAAAGTTTTAAAATGCCACAATATAG AGCAACTCAAATCACTCTGTCATATTCTTTACAATCAAGGTATCAAACACACCATAATGATGCAAGGCTTGTTTTTGTTC TTTGACTATTTTAAAAATAATCTCAAGTTAAGAAGTTTTAGAATGCTTAGCGAAGAGCAAGTGATTAACTTTCTTTTTAA TTTAGCCCAAAATAGAAAACCAAGCTCTATGGCTAAGTATGTGATGTATTTAAGACAATTCTTTGATTACTTAGATAGAA AAAAGCGTTATAGCTTTGATTTTATGCTTAAAAACCTAGCCTTTGCTAAAACTAAAGAAAGTCTGCCTAGACATTTAAAT GATAAAGACTTAAAGAGCTTTTTAAAAACGCTTTTAGAATATAAGCCCACAACTAGCCATGAAAAACGCAATAAATGTGT TTTACTCATTGTGATACTTGGGGGACTTAGAAAATGCGAAGTGTTAAACATAGAATTAAAACACATTCAAGTAGAAGAAC AAAATTACTCTATTTTAATTCAAGGTAAAGGCAGGAAAGAGAGAAAGGCTTATATAAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGATTATAGACTAAAATATTTCAATGGGGCATATCTTTTTAAAAAAGACAAGCAAAAAGC ACAAAATTCTTTAACGCTTTATAATTTTATCCCCTTAATCTTTAAACTAGCTCAAATCAAACACTATAAGCAATATGGCA CAGGTTTGCATTTATTTAGGCATAGTTTTGCAACTCTTATCTATCAAGAGACCCAAGACTTAGTTTTAACCAGCCGAGCC TTGGGGCATAGCTCTTTGCTCTCTACTAAGATTTATATCCATACTACACAAGAGCATAATAAGAAAGTGGCTCTTGTATT TGATAGTCTGATTGATAGTAAGAAGTAA Protein sequence : MLTNKLTKSQRELFDNIKAFLVAKVKNFTPIQDVNDMALILDIQNKVLKCHNIEQLKSLCHILYNQGIKHTIMMQGLFLF FDYFKNNLKLRSFRMLSEEQVINFLFNLAQNRKPSSMAKYVMYLRQFFDYLDRKKRYSFDFMLKNLAFAKTKESLPRHLN DKDLKSFLKTLLEYKPTTSHEKRNKCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDDYRLKYFNGAYLFKKDKQKAQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIDSKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 3e-100 | 64 |
