Gene Information

Name : HCW_07305 (HCW_07305)
Accession : YP_006223349.1
Strain : Helicobacter cetorum MIT 00-7128
Genome accession: NC_017737
Putative virulence/resistance : Virulence
Product : N-acetylneuraminic acid synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1590257 - 1591294 bp
Length : 1038 bp
Strand : -
Note : COG2089 Sialic acid synthase

DNA sequence :
ATGGATTTTAAGCTAGGCAGTAGAAGAATTGGCACTAATGAGCTACCCTTAGTGGTGGCAGAAATTGGGATTAATCATAA
TGGTAGCTTAGAAATTGCCAAACTTATGGTAGATGCAGCTAAAAATGCTGGCATTGAAGTCATAAAACACCAAACACACA
TCATTGAAGATGAAATGAGCTTAAGCGCTTTAAAGGTAATTCCAGGCAATAGTAAATCTAGCATTTATGAGATTATGAAA
AAATGTGCTTTAAGTAAAAGTGATGAAAGGGAGTTAAAAGAATATGTTGAAAAGCAAGGACTTATCTTTCTTTCCACGCC
TTTTAGCAGAGCGGCAGCGAATTTTTTAGAAGATTTGGGCGTAGTGGGCTATAAAATTGGCTCAGGCGAAATGAATAATA
TCCCACTTTTAAAACATATTGCTAGTTTTAACAAACCTATGATTATATCTACTGGAATGCATGATTTAGAAAGTGTAAAA
GAGTGTGTAAGCCCTATTATAGACAAAGTGCCTTTAGCGCTTTTGCACACCACTAACCTTTACCCCACACCCTTTGAACT
CGTGCGATTAAATGCTATGCTAGATTTAAAAAATGCTTTTGATGTGCCGGTAGGTTTGAGCGACCATACCTTGAATAATA
ATGCTTGTAAATGTGCTATAGCACTAGGGGCTAGTATAGTAGAACGGCACTTTACAGACACCAAAGATAGAGAAGGCCCT
GATATTATTTGCTCTATGGACAAAAATGAGGCCAAAGATTTAGTAACAAGCGCTAAAGAGATTTTTTTAATGCGTGGTGG
TGCTAAAACTAAAATTGATGAAGAGCAAGTTACAAGGGATTTTGCCTTTGCGACTATGGTTGCTATAAAAGACATTAAAA
AGGGTGAGAAAATCACTCAAAGTAACGCATGGGTAAAACGCCCAGGTGTTAAAGGGATTTTAGCTAAAGATTATGAAAAA
ACTTTAGGTAGAGTGGCTAAAATTGACATCAACATAGATGAGCATATCTGTGATGATATGCTAGAAAGTAGGTCATAA

Protein sequence :
MDFKLGSRRIGTNELPLVVAEIGINHNGSLEIAKLMVDAAKNAGIEVIKHQTHIIEDEMSLSALKVIPGNSKSSIYEIMK
KCALSKSDERELKEYVEKQGLIFLSTPFSRAAANFLEDLGVVGYKIGSGEMNNIPLLKHIASFNKPMIISTGMHDLESVK
ECVSPIIDKVPLALLHTTNLYPTPFELVRLNAMLDLKNAFDVPVGLSDHTLNNNACKCAIALGASIVERHFTDTKDREGP
DIICSMDKNEAKDLVTSAKEIFLMRGGAKTKIDEEQVTRDFAFATMVAIKDIKKGEKITQSNAWVKRPGVKGILAKDYEK
TLGRVAKIDINIDEHICDDMLESRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siaC NP_273132.1 polysialic acid capsule biosynthesis protein SiaC Not tested IHT-A Protein 8e-83 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCW_07305 YP_006223349.1 N-acetylneuraminic acid synthetase VFG0252 Protein 3e-83 58