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Name : HCW_06790 (HCW_06790) Accession : YP_006223246.1 Strain : Helicobacter cetorum MIT 00-7128 Genome accession: NC_017737 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 1463429 - 1464760 bp Length : 1332 bp Strand : + Note : COG0422 Thiamine biosynthesis protein ThiC DNA sequence : ATGCGAACAGAATATTTAAAAAACAGAAAAAACCCACAAACTCAGCTCTACTATGCTAAAAATGGGATTATTACCGAAGA AATGGCTTATATTGCCAATATTGAAAGCATAGAGGCAGAAGTTGTTAGAAAAGAAATTGCTAAAGGGCGCTTGATTGTCC CAGCTAATATCAATCATACCAACTTAAACCCTATGGGTATAGGCATAGCCTTACGCACCAAAATCAATGCTAATATTGGA AGTTCAGCCATTATTCATAGCATTGATGAAGAAGTAGAAAAGCTAAATATATCCATTAAATATGGTGCTGATACGGTTAT GGATTTATCCACAGGTGGAGATTTAGACGAAATCAGAAAGGCTATCATTGCTCATTCTAGTGTGCCTATTGGAACCGTGC CTATGTATCAAATCTTACATGATGTCAATAACGATGTGATGAAACTTGATATTCCCACCATGCTAAAAACTTTAGAAAAG CAAGCCAAACAAGGGGTAAGCTACTTTACTATCCATTGTGGGTTTTTACTAGAGCATATGCCCTATGTAAGTAAGCGAAA AATGGGAATTGTGAGTCGTGGAGGGAGCTTAATGGCATCTTGGATGATGCACTATCATAAAGAAAATCCTTTCTACACTG CTTTTGATGATATTTTGGCTATTTGCAAGGAATATGATGTCAGTTTGAGCTTGGGTGATTCTTTGCGTCCGGGTTGTCTA GCCGATGCAAGCGATACAGCGCAATTTGCAGAATTAAAAGTCTTAGGAGAACTTGCTAAAAGAGCTTATGAAAAAGATGT GCAAGTGATGATTGAAGGCCCCGGTCATGTGCCTTTAAATCAAATTGAAAGAAATGTAAGATTACAAAGAGAATATTGTA ATGATGCGCCTTTTTATGTTTTAGGGCCATTGGTTACTGATATTGCAGCTGGATATGACCATATCGCTAGTGCTATTGGC GCATGCTTAGCGGCTTATAAAGGAGTGGCTATGCTATGCTATGTAACCCCTAAAGAGCACTTGGGCTTACCTAATGCCAA AGATGTAAGAGAGGGCATTATTGCGTATAAAATCGCTGCTCATGCTGCTGATATTGCTAGAGGAAGAGTGGGTGCGAGAG TGAGAGATGACTTGATGAGTGATGCAAGATATGCGTTTGAATGGAACAAGCAATTTGAACTAGCCTTAGACCCAGAAAGA GCTAAAGAATATCACGATGAAGCATTACCAGAAGAAGTCTTTAAGGGAGCAGAATTTTGCTCTATGTGTGGTCCTAAGTT CTGTAGCTACAAAGTAAGCCAAGATATTTTCAAAAACTATCAAGCAGGATAA Protein sequence : MRTEYLKNRKNPQTQLYYAKNGIITEEMAYIANIESIEAEVVRKEIAKGRLIVPANINHTNLNPMGIGIALRTKINANIG SSAIIHSIDEEVEKLNISIKYGADTVMDLSTGGDLDEIRKAIIAHSSVPIGTVPMYQILHDVNNDVMKLDIPTMLKTLEK QAKQGVSYFTIHCGFLLEHMPYVSKRKMGIVSRGGSLMASWMMHYHKENPFYTAFDDILAICKEYDVSLSLGDSLRPGCL ADASDTAQFAELKVLGELAKRAYEKDVQVMIEGPGHVPLNQIERNVRLQREYCNDAPFYVLGPLVTDIAAGYDHIASAIG ACLAAYKGVAMLCYVTPKEHLGLPNAKDVREGIIAYKIAAHAADIARGRVGARVRDDLMSDARYAFEWNKQFELALDPER AKEYHDEALPEEVFKGAEFCSMCGPKFCSYKVSQDIFKNYQAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 9e-113 | 58 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 9e-113 | 58 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 2e-107 | 54 |
