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Name : HCW_06785 (HCW_06785) Accession : YP_006223245.1 Strain : Helicobacter cetorum MIT 00-7128 Genome accession: NC_017737 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1461980 - 1463419 bp Length : 1440 bp Strand : + Note : COG0174 Glutamine synthetase DNA sequence : ATGAAAATTTGTAATGATGAAAGCAGTATTAAAAAATTTTGGGATTTTTGCAAAGATAACGAAGTAGAATTTGTAGATTT TAGATTCACTGACATTAAAGGCACATGGAATCATATGACTTATTCTTTCAATGCCTTAAATGACGACATGCTTAAAGAAG GGATTCCTTTTGATGCAAGCTCTTTTAAGGCTTGGCAAAGTATAGAGCAATCAGACATGCTCTTGATTCCAGATTTGGTG CGTTATTTTATTGACCCTTTTAGCGCTGATGTAAGTGCGGTTGTTTTTTGTGATATCTATGATGTGTATAAAAATCAGCC TTATGAAAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAGCACTTAAAGGATTCTAATTTAGGCGATGTGGCATATT TTGGCGCAGAAAATGAATTTTTTATCTTTGATTCTATTAAGATTAAAGATGCCTCAAACTGCCAATATTATGAAGTAGAT AGCGAAGAGGGCGAATGGAACAGAGATAAAAGCTTTGAGGGTGGTGTGAATTATGGTCATAGACCAGGTAAGCAAGGGGG TTATCTACCTGTGCCACCAATGGATTCTATGATGGATATTCGCACTGAAATTGTTAAGGTTTTAAATCAAGTTGGCTTAG AAACCTTTGTAGTCCATCATGAAGTAGCTCAAGGACAAGGCGAAGTGGGCGTAAAATTTGGGGATTTAGTAGAGGCGGCT GATAATGTGCAAAAACTCAAATATGTAGTTAAAATGGTCGCTCATTTAAATGGCAAAACTGCAACTTTTATGCCAAAACC CCTTTATGGTGATAGCGGAAGTGGCATGCATACCCATGTAAGCATTTGGAAAAATAACGAAAACCTTTTTAGCGGTGATA CCTACAAAGGTTTAAGCGAATTTGCTTTGCACTTTTTAGGTGGAGTTTTATACCATGCTAGAGGTTTAGCTGCTTTTACC AATGCCTCAACCAACTCTTATAAACGCTTAATTCCGGGATTTGAAGCCCCCTCTATCTTAACTTATTCCGCACAAAATAG AAGCGCAAGCGTGCGTATTCCCTATGGAATTTCAAATAAGAGCGCACGATTAGAATTTAGATTCCCAGATAGCTCTTCAA ACCCCTACTTAGCCTTTTCAGCCATTCTTATGGCGGGCATTGATGGGTTTTTGAAAAAGCAAAATCCGGGCGAACCTATG GATATCAATCTTTTCAAGCTAACCTTAGATGAAATTAGAGAAAAAGGCATCAAGCAAATGCCCCACACTCTAAGAAGTGC GTTAGAAGAAATGCTTGCAGACAAAGATTATTTAAAAGAGGGACAAATCTTTAGCGAAGAATTTATCCAAGCTTATCAGT CCCTTAAATTTCATACTGAAGTATTTCCTTGGGAAAGCAAGCCTCACCCCTTTGAATTTATCACAACCTATTCTTGTTAA Protein sequence : MKICNDESSIKKFWDFCKDNEVEFVDFRFTDIKGTWNHMTYSFNALNDDMLKEGIPFDASSFKAWQSIEQSDMLLIPDLV RYFIDPFSADVSAVVFCDIYDVYKNQPYEKCPRSIAKKALQHLKDSNLGDVAYFGAENEFFIFDSIKIKDASNCQYYEVD SEEGEWNRDKSFEGGVNYGHRPGKQGGYLPVPPMDSMMDIRTEIVKVLNQVGLETFVVHHEVAQGQGEVGVKFGDLVEAA DNVQKLKYVVKMVAHLNGKTATFMPKPLYGDSGSGMHTHVSIWKNNENLFSGDTYKGLSEFALHFLGGVLYHARGLAAFT NASTNSYKRLIPGFEAPSILTYSAQNRSASVRIPYGISNKSARLEFRFPDSSSNPYLAFSAILMAGIDGFLKKQNPGEPM DINLFKLTLDEIREKGIKQMPHTLRSALEEMLADKDYLKEGQIFSEEFIQAYQSLKFHTEVFPWESKPHPFEFITTYSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 89 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HCW_06785 | YP_006223245.1 | glutamine synthetase | VFG1399 | Protein | 6e-87 | 46 |
