Gene Information

Name : HCW_06355 (HCW_06355)
Accession : YP_006223161.1
Strain : Helicobacter cetorum MIT 00-7128
Genome accession: NC_017737
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1366203 - 1367357 bp
Length : 1155 bp
Strand : +
Note : COG0659 Sulfate permease and related transporters (MFS superfamily)

DNA sequence :
ATGATAAAAAAAATAAAAGACGAATGGCTTTCAAACATTCATAAGGATTTGCTTTCTAGCTTTGTAGTGGGGCTTTCTAT
GATACCAGAGACTGCCGGATTTGCTATTATGGTTGGGTTAAGCCCTAGCATTGCCTTTTTTACAACCTTTTATATGGCGC
TTATTTTGTCTCTATTTGGCGCTAGAAAGGCTATGATTAGTGCAGCAGCTGGCTCAGTAGCTTTAGTTTTAGTTGGAGTT
TGCAAAGACTATGGGATAGAATATGTTGGTATTGCGACCATTATGGCAGGAATTATCCAAATCCTTTTTGGGATTTTTAA
AATAGGAAAATTATTAAAATATATTCCCCAATCTGTAATGTTTGGCTTTGTGAACGCACTAGCTATCTTACTATTAAAAG
AGCAATTCAAATTTTTTGAAAACCAATCTTATCCCATGTATATGCTAGTTCTTATAGGCATTCTTATCATTTATTTATTC
CCACTAATCACTAAAAAAGTCCCCTCAAATCTAATTTGTATTATTGCAGTTAGTGCAATAGCTATTATTTTTGATATTCA
AGTCCCAACTTTAGGCACTATAGAACAAGGCAAAATGGAATTTGAATTTATGGCATTACCTCATTTAGATATGCCTATTT
TTCTAGGCTTGCTACCTTATGCCCTATCTTTAGCCCTTGTTGGGACTATAGAGAGCTTGCTTACGGCTAAGACTTTAGAC
AACATCATTGGAGATTCTAGCGACAAAAACAAAGAATCTCAAGCGCAAGGTCTAGGCAATATCACCTCAGGAATCTTAGG
AGGCATGACAGGCTGTGCTTTAGTAGGTCAATCTATCATTAATGCCAAATCAGGTGCTACCACAAGGCTTTCTACATTCT
TTGCAGGATTTTCTCTCATTATCCTAGTGCTTGTCTTTAACGAATATGTAACCAAAATCCCCATAGCAGCAGTTGTTGCT
GTAATGATTATGATTTCTATAACAACCTTTAATCTCAAGTCTATTACCGAGATTACAAAAATTAGAATCCAAGATACGAT
TAACATGCTTATTGTGGTAGCTGTTGTATTAGCTACAGATAATCTAGCAATAGGTGTAGGCGTTGGGGTAGTAACCAATT
CATTGCTAAACAAAATGACCTTTAAGAAATATTAG

Protein sequence :
MIKKIKDEWLSNIHKDLLSSFVVGLSMIPETAGFAIMVGLSPSIAFFTTFYMALILSLFGARKAMISAAAGSVALVLVGV
CKDYGIEYVGIATIMAGIIQILFGIFKIGKLLKYIPQSVMFGFVNALAILLLKEQFKFFENQSYPMYMLVLIGILIIYLF
PLITKKVPSNLICIIAVSAIAIIFDIQVPTLGTIEQGKMEFEFMALPHLDMPIFLGLLPYALSLALVGTIESLLTAKTLD
NIIGDSSDKNKESQAQGLGNITSGILGGMTGCALVGQSIINAKSGATTRLSTFFAGFSLIILVLVFNEYVTKIPIAAVVA
VMIMISITTFNLKSITEITKIRIQDTINMLIVVAVVLATDNLAIGVGVGVVTNSLLNKMTFKKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 3e-56 43
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 4e-56 43
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 3e-56 43
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 4e-56 43
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 3e-56 43
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 4e-56 43
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 5e-56 43
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 4e-56 43
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 5e-56 43
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 4e-56 43
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 4e-56 43
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 4e-56 43
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 4e-56 43
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 4e-56 43
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 4e-56 43
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 4e-56 43
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 4e-56 43
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 4e-52 43
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 1e-51 43