Gene Information

Name : HCW_05220 (HCW_05220)
Accession : YP_006222939.1
Strain : Helicobacter cetorum MIT 00-7128
Genome accession: NC_017737
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.1.3
Position : 1120791 - 1121549 bp
Length : 759 bp
Strand : -
Note : COG0796 Glutamate racemase

DNA sequence : 
GTGAAAATAGGTGTTTTTGATAGTGGTATGGGGGGTTTAAGTGTCTTAAAGAGTCTTTTAAACGCTAACATGTTTGCTGA
AATTATCTATTATGGCGATACCGCTAGAGTGCCTTATGGCACTAAAGACCCAAAAACTATCAAACAATTTGGCTTAGAGG
CTTTAGAGTTTTTCAAGCCACACAAGATTGAATTATTGATTGTAGCATGCAACACAGCGAGCGCTTTAGCTTTAAAAGAC
ATGCAAGAGCATTCAAAAATCCCTATTGTAGGTGTGATTGAGCCAAGTATTTTGGCCATCAAACAACAAATCAAAAATAA
AAATGCCCCTATTTTAGTGCTAGGAACAAAGGCTACTATCCAATCTAATGCTTATGCAAACGCCCTTAACTTACAAGGCT
ATTCTAATATTTCTAATTTAGCCACTTCTCTTTTTGTGCCATTGATTGAAGAGGGAATTTTAGGGGGCGAGCTTTTAAAA
AATTGCATGAAGTATTACTTCCATACTCTAACTACAGCCCCACAAGCGATTATTTTAGGTTGCACACACTTTCCTTTGAT
TGCCAATGAGATTACACACTATTTTACTGAACGCTTTAATCCCCCCCTACTCATTCATTCAGGTGATGCCATTGTGGAAT
ATTTGCAACAACAATATGCTCTCAAAGAATGTTTATATAACCCCCCAAAGATAGAATTTTTTGCAAGCGGTGATGTCGCA
TGGCTAGAAAAACAAGCTAAAGATTGGCTGAAACTCTAG

Protein sequence : 
MKIGVFDSGMGGLSVLKSLLNANMFAEIIYYGDTARVPYGTKDPKTIKQFGLEALEFFKPHKIELLIVACNTASALALKD
MQEHSKIPIVGVIEPSILAIKQQIKNKNAPILVLGTKATIQSNAYANALNLQGYSNISNLATSLFVPLIEEGILGGELLK
NCMKYYFHTLTTAPQAIILGCTHFPLIANEITHYFTERFNPPLLIHSGDAIVEYLQQQYALKECLYNPPKIEFFASGDVA
WLEKQAKDWLKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glr AAR03910.1 glutamate racemase Not tested cag PAI Protein 2e-86 79
glr AAC44708.1 Glr Not tested cag PAI Protein 1e-87 79
glr AAR03940.1 glutamate racemase Not tested cag PAI Protein 1e-87 79
HP0549 NP_207344.1 glutamate racemase Not tested cag PAI Protein 5e-87 78
glr AAR03971.1 glutamate racemase Not tested cag PAI Protein 5e-87 78
glr AAR03882.1 glutamate racemase Not tested cag PAI Protein 9e-88 78
murI NP_223214.1 glutamate racemase Not tested cag PAI Protein 4e-85 78
HP0549 BAD13881.1 - Not tested cag PAI Protein 2e-84 78
HP0549 BAD13991.1 - Not tested cag PAI Protein 2e-87 77