|
Name : HCW_05200 (HCW_05200) Accession : YP_006222935.1 Strain : Helicobacter cetorum MIT 00-7128 Genome accession: NC_017737 Putative virulence/resistance : Unknown Product : ATP-dependent protease subunit HslV Function : - COG functional category : - COG ID : - EC number : 3.4.25.1 Position : 1116494 - 1117036 bp Length : 543 bp Strand : + Note : COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit DNA sequence : ATGTTTGAAGCAACAACGATTCTAGGTTATAGAGGGGAGATTGATGGCAAGAAATATGCCATTATTGGAGGTGATGGACA AGTTACTTTAGGTAATTGCATAGTAAAAGCGAATGCGACCAAGATTAGAAGTTTATACAACAATCAAGTTCTAAGCGGGT TTGCTGGAAGCACTGCTGATGCTTTTAGCTTGTTTGATATGTTTGAGCGTATTTTAGAGAGCAAGAAAGGCGATTTATTT AAAAGCGTGGTGGATTTTAGCAAAGAATGGCGTAAGGATAAATATTTGCGTCGTTTGGAGGCTATGATGATTGTGCTAAA TTTTGAGCATATTTTTATCCTAAGTGGCACAGGCGATGTTTTGGAGGCTGAAGATGGTAAGATTGCCGCTATTGGAAGTG GGGGTAATTATGCTCTAAGTGCGGCTAGAGCCTTAGATAATTTTGCACATTTAGAGCCAAAAAAGCTCGTAGAAGAATCT TTAAAAATTGCAGGAAATCTCTGCATTTACACTAACACTAATATTAAAATTTTGGAGCTTTAA Protein sequence : MFEATTILGYRGEIDGKKYAIIGGDGQVTLGNCIVKANATKIRSLYNNQVLSGFAGSTADAFSLFDMFERILESKKGDLF KSVVDFSKEWRKDKYLRRLEAMMIVLNFEHIFILSGTGDVLEAEDGKIAAIGSGGNYALSAARALDNFAHLEPKKLVEES LKIAGNLCIYTNTNIKILEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslV | YP_003728752.1 | protein HslV | Not tested | cag PAI | Protein | 1e-75 | 93 |
