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Name : ureB (HCD_03585) Accession : YP_006220943.1 Strain : Helicobacter cetorum MIT 99-5656 Genome accession: NC_017735 Putative virulence/resistance : Virulence Product : urease subunit beta Function : - COG functional category : - COG ID : - EC number : 3.5.1.5 Position : 761575 - 763284 bp Length : 1710 bp Strand : + Note : COG0804 Urea amidohydrolase (urease) alpha subunit DNA sequence : ATGAAAAAGATTAGTAGAAAAGAATACGCATCTATGTATGGTCCCACTACTGGCGATAAAGTGAGATTGGGCGATACAGA ACTTATTGCTGAAGTAGAACACGACTACACTATTTATGGTGAAGAGCTTAAATTTGGTGGCGGTAAAACTTTAAGAGAAG GCATGAGTCAGTCTAATAATCCTAGCAAGGAAGAGTTAGATTTAATCATCACTAACTGCCTAATCGTAGATTATACCGGT ATCTATAAGGCTGATATTGGCATTAAGGATGGCAAAATCGCTGGCATTGGTAAGGGCGGAAACAAGGATATGCAAGATGG CGTTAAAAACAATCTTTGCGTAGGTCCTGCTACTGAAGCGTTAGCTGGCGAAGGCTTGATTGTTACTGCAGGTGGGATTG ATACACATATCCACTTCATTTCTCCGCAACAAATTCCTACAGCTTTTGCAAGCGGTGTAACTACTATGATTGGTGGAGGC ACAGGTCCTGCTGATGGAACAAACGCTACAACCATTACTCCGGGCAGAAGAAATTTAAAGTGGATGCTAAGAGCCGCAGA AGAATATTCTATGAACTTAGGTTTCTTAGGTAAAGGTAATGCCTCTAATGACGCATGCTTAGCTGATCAAATTGAGGCGG GTGCGATTGGCTTTAAAATCCACGAAGACTGGGGCACAACTCCATCTGCAATCAACCATGCTTTAGACATTGCTGATAAA TATGATGTTCAAGTGGCCATCCATACAGATACTTTAAATGAAGCAGGTTGTGTAGAAGACACTATGGCTGCCATTGCTGG ACGCACAATGCATACATTCCACACTGAAGGTGCTGGTGGAGGACACGCTCCTGATATCATTAAAGTAGCTGGTGAGCATA ATATTCTACCTGCTTCAACTAACCCTACTATTCCTTTCACAGTGAATACTGAAGCAGAGCATATGGATATGTTGATGGTT TGCCACCACTTAGATAAGAGCATTAAAGAAGATGTTCAGTTCGCTGATTCAAGAATCCGCCCCCAAACCATTGCGGCTGA AGATGCTTTGCATGACATGGGAATTTTCTCTATTACAAGTTCGGACTCACAAGCTATGGGTCGTGTGGGTGAAGTTATCA CTAGAACTTGGCAAACCGCTGATAAAAACAAAAAAGAGTTTGGTCGCTTGAAAGAAGAAAAGGGCGATAATGATAACTTT AGAATCAAACGCTACTTGTCTAAATACACTATTAACCCAGCGATTGCTCATGGCATTAGTGAGTATGTTGGTTCTGTAGA AGTAGGCAAGGTGGCTGACTTAGTATTGTGGAGTCCAGCATTCTTTGGTGTGAAGCCAAACATGATTATTAAGGGTGGTT TCATCGCTCTTTCTCAAATGGGTGATGCAAACGCTTCTATTCCTACCCCTCAACCTGTATATTACAGAGAGATGTTTGCT CATCATGGTAAAGCTAAGTATGATGCAAATATCACTTTTGTATCTCAAGTAGCTTATGAAAACGGCATTAAAGAAGAGTT AGGACTTGAAAGACAAGTATTACCAGTTAAAAATTGCAGAAATATCACTAAAAAGGACATGCAATTTAATGACACTACCG CTCATATTGAAGTCAACCCTGAAACCTACCATGTGCATGTAGATGGCAAAGAAGTAACTTCTAAAGCGGCCGATAAAGTA AGCTTGGCCCAACTCTTTAGTATTTTCTAG Protein sequence : MKKISRKEYASMYGPTTGDKVRLGDTELIAEVEHDYTIYGEELKFGGGKTLREGMSQSNNPSKEELDLIITNCLIVDYTG IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLCVGPATEALAGEGLIVTAGGIDTHIHFISPQQIPTAFASGVTTMIGGG TGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLGKGNASNDACLADQIEAGAIGFKIHEDWGTTPSAINHALDIADK YDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMV CHHLDKSIKEDVQFADSRIRPQTIAAEDALHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNF RIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFA HHGKAKYDANITFVSQVAYENGIKEELGLERQVLPVKNCRNITKKDMQFNDTTAHIEVNPETYHVHVDGKEVTSKAADKV SLAQLFSIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 3e-154 | 62 |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 3e-154 | 62 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 4e-147 | 60 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 4e-147 | 60 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 4e-147 | 60 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 4e-147 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureB | YP_006220943.1 | urease subunit beta | VFG0270 | Protein | 0.0 | 98 |
