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Name : HCD_01960 (HCD_01960) Accession : YP_006220626.1 Strain : Helicobacter cetorum MIT 99-5656 Genome accession: NC_017735 Putative virulence/resistance : Unknown Product : IS200 insertion sequence from SARA17 Function : - COG functional category : - COG ID : - EC number : - Position : 405148 - 405564 bp Length : 417 bp Strand : + Note : COG1943 Transposase and inactivated derivatives DNA sequence : ATGAAACAAATTGATAATATTAGACATGGCAGACATTGTGTTTTTTTAATGCATGTGCATTTAGTATTTGTAACTAAATA TAGGCGTAAAGCATTCAACAAAGAAGTTATAGACTTTTTAGGTTCTGTATTTGCTAAGGTATGCAAAGACTTTGAAAGCG AGTTAGTAGAATTTGATGGGGAAAGCGACCATGTGCATTTACTTATCAATTATCCACCAAAAGTTAGTGTTAGTAGGTTA GTTAATTCTTTAAAGGGTGTTAGTAGTCGTTTGGTTAGACAACAAAATTTTAAAAATGTTAAAGCTACTTTGTGGGGCAA TCATTTATGGTCGCCTAGTTATTTTGCTGGAAGCTGTGGGGGTGCTCCTTTAGAAATCATTAAGCAATATATCCAAGAGC AAGAAACACCACATTAG Protein sequence : MKQIDNIRHGRHCVFLMHVHLVFVTKYRRKAFNKEVIDFLGSVFAKVCKDFESELVEFDGESDHVHLLINYPPKVSVSRL VNSLKGVSSRLVRQQNFKNVKATLWGNHLWSPSYFAGSCGGAPLEIIKQYIQEQETPH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAJ31328.1 | insertion sequence IS606 transposase homolog B | Not tested | cag PAI | Protein | 2e-58 | 90 |
| tnpA | AAR03856.1 | transposase A-like protien | Not tested | cag PAI | Protein | 4e-59 | 90 |
