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Name : HCD_01845 (HCD_01845) Accession : YP_006220608.1 Strain : Helicobacter cetorum MIT 99-5656 Genome accession: NC_017735 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 364558 - 366057 bp Length : 1500 bp Strand : - Note : COG0753 Catalase DNA sequence : ATGATTAATAAGGATTTAAAACAAACTAGTCCTTTTGGTGCTCCAATTGGCGATGATAACAATGTGTTTACGGCCGGTCC TAGGGGTCCTGTTCTTTTACAAAGCACTTGGTTTTTGGAGAAGCTAGCAGCATTTGATAGAGAAAGAATTCCTGAAAGAG TGGTGCATGCTAAGGGGAGTGGAGCTTATGGCACTTTCACCGTAACTAAGGATATTACTAAATACACTAAAGCAAAAATT TTCTCTAAAGTAGGCAAGAAGACAGAATGCTTTTTTAGATTTTCTACTGTGGCTGGTGAGAGAGGTAGTGCGGATGCGGT GAGAGACCCAAGAGGCTTTGCGATGAAGTATTACACCGAGGAGGGCAATTGGGATTTGGTAGGAAATAACACACCTATTT TCTTTATTCGTGATGCGATTAAATTTCCTGATTTTATTCACACTCAAAAAAGAGATCCTCAAACTAACTTACCTAATGCT ACTATGGTATGGGATTTTTGGAGCAATGTTCCTGAGAGTTTGCACCAAGTAACATGGCTTATGGGTGATAGAGGTATTCC TAAATCTTTCCGTCATATGGATGGTTTTGGTAGCCACACATTTAGTCTTATTAATGCCAAAAATGAGCGTTTTTGGGTGA AGTTCCACTTCAAGTGTATGCAAGGCATTAAGAATTTGACAAGTGAAGAAGCTGCAGAGCTTAGAAAACACGATATGGAT TCACATCAACGAGACCTATTTGAAGCGATTGCTAGAAAGGATTTTCCAAAGTGGCGTATGAGTATTCAAATTATGCCAGA AGCAGATGCTAAGAAATACAAATTCCATCCGTTTGATGTAACTAAGGTTTGGAGTCAGAAAGATTACCCATTAATGGAAG TAGGTATTGTAGAGTTGAATAGAAACCCTGAGAACTATTTTGCAGAAGTAGAGCAGGCGGCGTTCAACCCTGCTAATGTA GTTCCTGGAATTGGTTATAGTCCTGATAGGATGTTGCAAGGTCGCCTATTCTCTTATGGTGATACACAACGCTATCGCTT AGGCATTAATCACTCTCAGTTGCCGGTCAACAAGCCAAGATGTCCATTCCATTCCACTACTAGAGATGGCTTTATGCAAA ATGGACACTATGGTGCTTTACAAAACTATACCCCCAGTTCATTACCAGGCTACAAAGAAGATAAGAATGCTAGAGAGCCT AAGCTCAATTTAACTTATCTTGAGAAAGAGTATGAAGTGTGGAATTGGGATTATAGGGCTGAAGATAGCGATTATTATAC TCAAGCAGGTGATTTGTATCGCTTAATGAAAGCTGATGAAAAAGAGAGATTGTATGACAATATCGCAGGTTCTATGGTGC ATGTTCCTAAGGAAATTGTTGATAAGCAGATGGAACATTTCAAGAAGGCTGACCCAAAATATGCTGAAGGCGTTAAAAAA GCCCTTGAAAAACACATGAAGATGATGAAAGATATGAAAATGAAGGGCATGAAGAAATAA Protein sequence : MINKDLKQTSPFGAPIGDDNNVFTAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPIFFIRDAIKFPDFIHTQKRDPQTNLPNA TMVWDFWSNVPESLHQVTWLMGDRGIPKSFRHMDGFGSHTFSLINAKNERFWVKFHFKCMQGIKNLTSEEAAELRKHDMD SHQRDLFEAIARKDFPKWRMSIQIMPEADAKKYKFHPFDVTKVWSQKDYPLMEVGIVELNRNPENYFAEVEQAAFNPANV VPGIGYSPDRMLQGRLFSYGDTQRYRLGINHSQLPVNKPRCPFHSTTRDGFMQNGHYGALQNYTPSSLPGYKEDKNAREP KLNLTYLEKEYEVWNWDYRAEDSDYYTQAGDLYRLMKADEKERLYDNIAGSMVHVPKEIVDKQMEHFKKADPKYAEGVKK ALEKHMKMMKDMKMKGMKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-141 | 61 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-94 | 48 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-94 | 48 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 1e-96 | 48 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-94 | 48 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-94 | 48 |
