Gene Information

Name : HCD_01695 (HCD_01695)
Accession : YP_006220581.1
Strain : Helicobacter cetorum MIT 99-5656
Genome accession: NC_017735
Putative virulence/resistance : Virulence
Product : N-acetylneuraminic acid synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 340902 - 341939 bp
Length : 1038 bp
Strand : -
Note : COG2089 Sialic acid synthase

DNA sequence :
ATGAGTTTTAGCTTAGGCAGTAGAAAAATAGGCGCTAACGAGCCACCCTTAGTGGTTGCAGAAATTGGGATTAATCATAA
TGGTAGTTTAGAGATTGCCAAACTTATGGTAGATGCAGCTAAAAATGCTGGCATTGAAGTCATTAAACACCAAACACATA
TTATTGAAGATGAAATGAGCTTAAGTGCTTTAAAAGTAATTCCAGGAAATAGTAAAAGAAGTATTTATGAGATTATGAAA
AAATGTGCTTTAAGTAAGAGTGATGAAAGAGAGTTAAAAGAATATATAGAAAAACAAGGACTCATCTTTCTTTCCACGCC
TTTTAGCAGAGCTGCAGCGAATTTTTTAGAGGATTTGGGTGTTGTTGGGTATAAGATTGGCTCTGGCGAAATGAATAATA
TTCCTTTATTAAAACATATCGCTCATTTTAAAAAGCCTATGATAATTTCTACTGGAATGCATGATTTAGAGAGCGTGAAA
GAGTGTATCAGCCCTATTATAGATAAAGTGCCTTTAGCACTTTTACACACCACTAATCTCTACCCTACGCCTTTTGAACT
CGTGCGATTAAATGCTATGCTGGATTTAAAAAATGCCTTTGATGTGCCGGTAGGTTTGAGTGATCATACTCTAAATAATA
ATGCCTGTAAATGTGCCATAGCTTTAGGGGCAAGCATAGTGGAGCGGCATTTTACAGATACTAAAGACAGAGAGGGACCT
GATATTATTTGTTCTATGGACAAAAATGAGGCTAAAGATTTAGTAATAAGTGCTGAAGAAATTTTTTTAATGCGTGGTGG
CGCTAAAACTAAAATTGATGAAGAGCAAGTTACACGAGACTTTGCTTTTGCGACCATGGTAGCTATAAAACCTATTAAAA
AGGGTGAGAAAATCAGCACAAGTAACGCATGGGTAAAACGACCAGGGGTTAAAGGGATTCTAGCTAAAGATTATGAAAAA
ACTTTAGGTAGAGTGGCTAAAATTGACATCAGCATAGATGAGCATATCTGTGATGATATGCTAGAAAATGAGAAATAG

Protein sequence :
MSFSLGSRKIGANEPPLVVAEIGINHNGSLEIAKLMVDAAKNAGIEVIKHQTHIIEDEMSLSALKVIPGNSKRSIYEIMK
KCALSKSDERELKEYIEKQGLIFLSTPFSRAAANFLEDLGVVGYKIGSGEMNNIPLLKHIAHFKKPMIISTGMHDLESVK
ECISPIIDKVPLALLHTTNLYPTPFELVRLNAMLDLKNAFDVPVGLSDHTLNNNACKCAIALGASIVERHFTDTKDREGP
DIICSMDKNEAKDLVISAEEIFLMRGGAKTKIDEEQVTRDFAFATMVAIKPIKKGEKISTSNAWVKRPGVKGILAKDYEK
TLGRVAKIDISIDEHICDDMLENEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siaC NP_273132.1 polysialic acid capsule biosynthesis protein SiaC Not tested IHT-A Protein 1e-80 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCD_01695 YP_006220581.1 N-acetylneuraminic acid synthetase VFG0252 Protein 5e-81 57