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Name : HCD_08330 (HCD_08330) Accession : YP_006221858.1 Strain : Helicobacter cetorum MIT 99-5656 Genome accession: NC_017735 Putative virulence/resistance : Unknown Product : IS606 transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1755871 - 1757193 bp Length : 1323 bp Strand : + Note : COG0675 Transposase and inactivated derivatives DNA sequence : ATGAAAGTAAATAAGGGCTTTAAATTTCGTTTGTATCCTACCAAAGAGCAACAGACCAAATTACAACACTCTTTTTTTGT CTATAACCAAGCCTATAACATTTGCTTAAATCTACAACAAGAGCAATACGAAAAAAACAAAGATTTACCCACTAAACAAA GAAAATGGCAAAAATCAAGCGAATTAGATAGTGCGATTAAGCACCATTTAAAAGCTAGGAATTTAAGTTTTAGTAGTGTA GTCGCTCAACAATCACGCATGAATGCAGAAAGAGCCTTAAGAGATGCCTTTAAAGTCAAAAATAGGGGCTTTCCTAAATT TAAAAACTCTAAATTTGCTAAACAAAGTTTTACTTGGAATAATCAAGGCTTTTCTATCAAAGACTTTAACGAACGCTTTA AGATGTTTAACTTAATGAAAATGCCCTTAAAAATGCGTATGCATAGAGACTTACCCCTTAATGCTAAGATTAAACAAATC GTAGTCTCTTGCTCTCATCAAAAATATTTTGTTAGTTTTAGCATAGAATACGAAAAAGAGCTTAACACTATTAAAGAGCC TAGAAATTGTGTCGGTGTGGACTTAAATATCTATGATATAGCTTTAAGCGTTGATTTAAAAGAATATGAAAAACTAACCG ACCTAGAACAATACCAAAAAGACATGAAAGAACTAGGTTTAAAAGTAGATGAAAATATCAATCTAAAACGACTTATTCCT ACTTATTCTAAACTACATTCTTTTAAAAAATACTCTAAAGAATTTAAAAGACTACAAAGAAAACAAAGCCGTAGGGTTTT AAAATCTAAACAAAATAAAATCAAACTAGGAGGTAATTTTTACAAAACTCAAAAAAAATTAAACAAAGCCTTTGATAAAT CAAGCTATCAAAAACTAGACAGATACCATAAAATCACAAGCGAACTTTCAAAGCAATTTGAATTGATAGTAGTTGAAGAC TTACAAATTAAGAACATGACCAAAAGAGCCAAACTCAAAAATGTTAAACAAAAGAGTGGGCTTAATAAGTCTATACTAAA TACTTCATTCTATCAAATCATCTCTTTTTTAGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGCTCCCCCAC AATATACGAGTAAAACTTGTCATAGTTGTGGGCAAATCAACCACGAGCTTAAATTAAATCATAGAGAATATCTGTGTCAA AATTGCGGATATATAGAGCATAGAGATATAAACGCCGCAAGTAATATTTTAAGCAAAGGGTTAAGTCTTCTTGGGTTAGG AAATAGCCTTGCAGACTTTAAAGAGCAAAGCCTTTCGTATTAG Protein sequence : MKVNKGFKFRLYPTKEQQTKLQHSFFVYNQAYNICLNLQQEQYEKNKDLPTKQRKWQKSSELDSAIKHHLKARNLSFSSV VAQQSRMNAERALRDAFKVKNRGFPKFKNSKFAKQSFTWNNQGFSIKDFNERFKMFNLMKMPLKMRMHRDLPLNAKIKQI VVSCSHQKYFVSFSIEYEKELNTIKEPRNCVGVDLNIYDIALSVDLKEYEKLTDLEQYQKDMKELGLKVDENINLKRLIP TYSKLHSFKKYSKEFKRLQRKQSRRVLKSKQNKIKLGGNFYKTQKKLNKAFDKSSYQKLDRYHKITSELSKQFELIVVED LQIKNMTKRAKLKNVKQKSGLNKSILNTSFYQIISFLDYKQQHNGKLLVKAPPQYTSKTCHSCGQINHELKLNHREYLCQ NCGYIEHRDINAASNILSKGLSLLGLGNSLADFKEQSLSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | CAJ31329.1 | insertion sequence IS606 transposase homolog A | Not tested | cag PAI | Protein | 6e-158 | 81 |
| tnpB | AAR03857.1 | transposase B-like protein | Not tested | cag PAI | Protein | 4e-161 | 81 |
