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Name : smpB (HCD_00785) Accession : YP_006220399.1 Strain : Helicobacter cetorum MIT 99-5656 Genome accession: NC_017735 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 159401 - 159859 bp Length : 459 bp Strand : + Note : COG0691 tmRNA-binding protein DNA sequence : TTGAAACTCATTGCTAACAATAAAAAAGCCTATTTTGATTATGAAATTTTAGAGACTTTAGAAGCAGGGTTGGTGCTTTT AGGCTCTGAAGTAAAAGCTTTAAGACAATCTAGGGTGAATTTAAAGGATAATTTTGTTAAAATAATCAAAAGAGAAGCTT TTTTATTTGGTGTTCATATATCATATTTAGATACAATCCATGCCTATTATAAGCCAAATGAAAGGCGAGAGCGTAAATTG CTTCTGCATAAAAAGCAATTGCTCAAATGGCAGGCTGAGGTATCCAAAGAACGCTTGAGTATTGTAGGGCTAAAGCTATA TTTTAACGAACGAAATAGAGCTAAAATCCAAATCGCTTTAGTGAAAGGAAAAAAATTGCACGACAAAAGACAGAGCCTAA AGGAAAAAGCGCTCAATAAAGAAGTTCTTGCTAGTTTAAAACACCACTTTAAAGGATAA Protein sequence : MKLIANNKKAYFDYEILETLEAGLVLLGSEVKALRQSRVNLKDNFVKIIKREAFLFGVHISYLDTIHAYYKPNERRERKL LLHKKQLLKWQAEVSKERLSIVGLKLYFNERNRAKIQIALVKGKKLHDKRQSLKEKALNKEVLASLKHHFKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 3e-13 | 42 |
