Gene Information

Name : HCD_08070 (HCD_08070)
Accession : YP_006221808.1
Strain : Helicobacter cetorum MIT 99-5656
Genome accession: NC_017735
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1711335 - 1711712 bp
Length : 378 bp
Strand : +
Note : COG3328 Transposase and inactivated derivatives

DNA sequence :
GTGAAAGTAAAGGAGGCTAATTTTTGGCTTAGTGTTTTAAGCGATTTAAGAAATAGAGGGTTAGAGGATATTCTTATAGC
CTCAGTTGATGGTTTAAAAGGATTTCCTGAAGCTATCAATAGTATTTTTCCTAAAACAGAAGTTCAGCTTTGTATAGTCC
ATCAAATTAGAAATTCTATTAAATTTGTGGGGAGCAAGTATCAAAAGGAATTTCTAAAAGATTTAAAGCTAGTCTATCAA
GCCTCTACTAAAGAGATAGCTGAAAGTGAGCTTATTAGACTTAATGAAAAATGGGGTAGTAAGTATCTCTTAGTGCTTAA
ATCTTGGCAAAATAAATGGGATAATCTCTCTTTATTTTTTAAGTATCCCCCTGCTTAG

Protein sequence :
MKVKEANFWLSVLSDLRNRGLEDILIASVDGLKGFPEAINSIFPKTEVQLCIVHQIRNSIKFVGSKYQKEFLKDLKLVYQ
ASTKEIAESELIRLNEKWGSKYLLVLKSWQNKWDNLSLFFKYPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_37 AAZ04446.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-28 60