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Name : HCD_07940 (HCD_07940) Accession : YP_006221782.1 Strain : Helicobacter cetorum MIT 99-5656 Genome accession: NC_017735 Putative virulence/resistance : Unknown Product : IS606 transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1683672 - 1684964 bp Length : 1293 bp Strand : - Note : COG0675 Transposase and inactivated derivatives DNA sequence : TTGTATCCTACCAAAGAGCAACAGACCAAATTACAACACTCTTTTTTTGTCTATAACCAAGCCTATAACATTTGCTTAAA TCTACAACAAGAGCAATACGAAAAAAACAAAGATTTACCCACTAAACAAAGAAAATGGCAAAAATCAAGCGAATTAGATA GTGCGATTAAGCACCATTTAAAAGCTAGGAATTTAAGTTTTAGTAGTGTAGTCGCTCAACAATCACGCATGAATGCAGAA AGAGCCTTAAGAGATGCCTTTAAAGTCAAAAATAGGGGCTTTCCTAAATTTAAAAACTCTAAATTTGCTAAACAAAGTTT TACTTGGAATAATCAAGGCTTTTCTATCAAAGACTTTAACGAACGCTTTAAGATGTTTAACTTAATGAAAATGCCCTTAA AAATGCGTATGCATAGAGACTTACCCCTTAATGCTAAGATTAAACAAATCGTAGTCTCTTGCTCTCATCAAAAATATTTT GTTAGTTTTAGCATAGAATACGAAAAAGAGCTTAACACTATTAAAGAGCCTAGAAATTGTGTCGGTGTGGACTTAAATAT CTATGATATAGCTTTAAGCGTTGATTTAAAAGAATATGAAAAACTAACCGACCTAGAACAATACCAAAAAGACATGAAAG AACTAGGTTTAAAAGTAGATGAAAATATCAATCTAAAACGACTTATTCCTACTTATTCTAAACTACATTCTTTTAAAAAA TACTCTAAAGAATTTAAAAGACTACAAAGAAAACAAAGCCGTAGGGTTTTAAAATCTAAACAAAATAAAATCAAACTAGG AGGTAATTTTTACAAAACTCAAAAAAAATTAAACAAAGCCTTTGATAAATCAAGCTATCAAAAACTAGACAGATACCATA AAATCACAAGCGAACTTTCAAAGCAATTTGAATTGATAGTAGTTGAAGACTTACAAATTAAGAACATGACCAAAAGAGCC AAACTCAAAAATGTTAAACAAAAGAGTGGGCTTAATAAGTCTATACTAAATACTTCATTCTATCAAATCATCTCTTTTTT AGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGCTCCCCCACAATATACGAGTAAAACTTGTCATAGTTGTG GGCAAATCAACCACGAGCTTAAATTAAATCATAGAGAATATCTGTGTCAAAATTGCGGATATATAGAGCATAGAGATATA AACGCCGCAAGTAATATTTTAAGCAAAGGGTTAAGTCTTCTTGGGTTAGGAAATAGCCTTGCAGACTTTAAAGAGCAAAG CCTTTCGTATTAG Protein sequence : MYPTKEQQTKLQHSFFVYNQAYNICLNLQQEQYEKNKDLPTKQRKWQKSSELDSAIKHHLKARNLSFSSVVAQQSRMNAE RALRDAFKVKNRGFPKFKNSKFAKQSFTWNNQGFSIKDFNERFKMFNLMKMPLKMRMHRDLPLNAKIKQIVVSCSHQKYF VSFSIEYEKELNTIKEPRNCVGVDLNIYDIALSVDLKEYEKLTDLEQYQKDMKELGLKVDENINLKRLIPTYSKLHSFKK YSKEFKRLQRKQSRRVLKSKQNKIKLGGNFYKTQKKLNKAFDKSSYQKLDRYHKITSELSKQFELIVVEDLQIKNMTKRA KLKNVKQKSGLNKSILNTSFYQIISFLDYKQQHNGKLLVKAPPQYTSKTCHSCGQINHELKLNHREYLCQNCGYIEHRDI NAASNILSKGLSLLGLGNSLADFKEQSLSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | CAJ31329.1 | insertion sequence IS606 transposase homolog A | Not tested | cag PAI | Protein | 2e-152 | 80 |
| tnpB | AAR03857.1 | transposase B-like protein | Not tested | cag PAI | Protein | 1e-155 | 80 |
