Gene Information

Name : HCD_07640 (HCD_07640)
Accession : YP_006221725.1
Strain : Helicobacter cetorum MIT 99-5656
Genome accession: NC_017735
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB11
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1620613 - 1621554 bp
Length : 942 bp
Strand : -
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGGCAATTTCAGCAATCTTAGAGGTTTTAATTTCTAAGTTAAGACCCTATTTGGAACTAGACATCAATGAGGTAATTTT
CAATGAACCCTACAAGTTTTATCTTGTTAGGGGTTCTAGCTATGAATTGCTTGAAAACAAAGCCTTTGATGAGAAGTTTT
TAATGAATTTTTGTGAACAACTTGCTACGCATAGAAACCTGTTCTTTAATCATAACTTCCCCCATTTAGCATGCTCTATT
CCTTTTACACGCTATAGGGTCAATGCCTTGCACCCAAGCGTTACAGCCAATAATAGCATTTCTATTTGTATTCGTGTGCC
AAGCAATTTTAAGTTTAAAATCAATGCGTTTGTTTTAGGGCAAAAATGCCAAGAAAAAGGAATTGATTACGCCTTTATTT
TAAACTTAGTAAGACTTGGTAAAAACATTTTAGTTAGTGGAGGGACAGCTAGTGGTAAGACTAGCTTTGTGAATAGCTTG
ATTGAAGAAATTCCTATTACTCAAAGAGTTATCACGGTTGAAGATAGCCCAGAATTACACCTAAAAAATCCTAATCAAGT
TAATGTTGTAGTGGGTAAAAATGAAGATTCTAATTTTACCTATGAAAACGCCCTAAACTCCGCCATGAGAATGAGTCCTG
AAAGAGTGCTATTAGGCGAGATTGATACAAGAAATACCGCACTCTTTTTAAGGCTTTCAAACACAGGACATAGCGGAATG
ATAAGCACTTTACACGCTAATAGCGTTGTAGAAGCCTTTAATGCCATTGGTATGAATGTCAAAATGAATGCTGGTAAGGA
TATTGACACTAGCACGCTTCTAGACTTTTTTATTGCTGGAATGGATTTTATTATCCAAATTGTTAAAAAGGGCAATGAAA
GAATTATTGAAGATGTCTTAGATGTTAAAAAGGAATTGAGACTTGCTCTCAATAGGGAATAA

Protein sequence : 
MAISAILEVLISKLRPYLELDINEVIFNEPYKFYLVRGSSYELLENKAFDEKFLMNFCEQLATHRNLFFNHNFPHLACSI
PFTRYRVNALHPSVTANNSISICIRVPSNFKFKINAFVLGQKCQEKGIDYAFILNLVRLGKNILVSGGTASGKTSFVNSL
IEEIPITQRVITVEDSPELHLKNPNQVNVVVGKNEDSNFTYENALNSAMRMSPERVLLGEIDTRNTALFLRLSNTGHSGM
ISTLHANSVVEAFNAIGMNVKMNAGKDIDTSTLLDFFIAGMDFIIQIVKKGNERIIEDVLDVKKELRLALNRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 3e-75 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCD_07640 YP_006221725.1 type IV secretion system protein VirB11 VFG1979 Protein 1e-59 44