Gene Information

Name : HCD_06765 (HCD_06765)
Accession : YP_006221562.1
Strain : Helicobacter cetorum MIT 99-5656
Genome accession: NC_017735
Putative virulence/resistance : Virulence
Product : UTP--glucose-1-phosphate uridylyltransferase subunit GalU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1440365 - 1441186 bp
Length : 822 bp
Strand : -
Note : COG1210 UDP-glucose pyrophosphorylase

DNA sequence :
ATGATTAAAAAATGTCTTTTCCCTGCCGCTGGCTATGGCACACGCTTTTTACCGATTACTAAAACCATTCCTAAAGAGAT
GTTGCCTATTGTAGATAAACCTTTAATGCAATATGCTGTGGAAGAAGCTATGCAAGCAGGCTGTGAAGTCATGGCGATTG
TTACAGGCAGAAACAAGCGAAGCCTAGAAAATTATTTTGATACGAGTTATGAAATAGAGCATCAAATTCAAGGCACAAGC
AAAGAGAACGCCTTAAAAAGCATCCGCAATATCATAGAAAAATGCTGTTTTTCCTATGTGCGACAAAAACAAATGAAGGG
TCTAGGGCATGCGATATTAACCGGAGAAGCCCTTATAGGCAATGAGCCTTTTGCGGTGATTTTGGCTGATGATTTATGCA
CAAGCAACGAACATCCAAGTGTCTTAAAGCAAATGACGACCTTGTATCAAAAATATCAATGCCCCATTGTTGCCATTGAA
GAAGTGGCGTTAGAAGAAGTCTCAAAATACGGCGTGATTAAGGGCGAATTATTAGAAGATGGGGTGTATGAGATTAAAGA
TATGGTTGAAAAACCTAGTCAAGAAGCCGCCCCAAGCAATTTGGCTGTGATAGGGCGTTACATTCTAACCCCTGATATTT
TTGATATTTTGCGTATGACTAAACCCGGTAAAAATAATGAAATCCAAATTACAGACGCCCTTTTAACTCAAGCTAAACAA
AAACGCATTATCGCCTATCAATTCAAAGGCAAACGCTATGATTGTGGAAGCGTAGAAGGCTATATTGAAGCGACTAATGC
GTATTATAAAAAACGCTTATAA

Protein sequence :
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLMQYAVEEAMQAGCEVMAIVTGRNKRSLENYFDTSYEIEHQIQGTS
KENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCTSNEHPSVLKQMTTLYQKYQCPIVAIE
EVALEEVSKYGVIKGELLEDGVYEIKDMVEKPSQEAAPSNLAVIGRYILTPDIFDILRMTKPGKNNEIQITDALLTQAKQ
KRIIAYQFKGKRYDCGSVEGYIEATNAYYKKRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 3e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCD_06765 YP_006221562.1 UTP--glucose-1-phosphate uridylyltransferase subunit GalU VFG0964 Protein 3e-54 45