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Name : HCD_06535 (HCD_06535) Accession : YP_006221519.1 Strain : Helicobacter cetorum MIT 99-5656 Genome accession: NC_017735 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : - COG ID : - EC number : - Position : 1389013 - 1390080 bp Length : 1068 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGTTAAATAACAAACTCACCAAATCTCAAAGAGAACTCTTTGATAATCTTAAAGCCTTTTTATACACTAAGGTTAAAAA TTTCACACCCATTCAAGATGTGAATGATATGGCTTTCATATTAGACACACAAGATAAAATCCTAAAATGCCACAATATAG AGCAATTAAAACAACTCTGTCATATTCTTTACAATCAAGGTATTAAGCACACGATTATGATGCAAGGCTTGTTTTTATTC TTTGAATACTTTAGAGATAATCTCAAACTAAGAAGTTTTAGAACGCTTAGCGAAGAGCAAGTCATTAACTTTCTCTTTGA ACTCGCCCAAAATAGAAAGCCCAGCTCTATGGCTAAGTATGTGATGTATTTAAGACAATTCTTTGATTACTTGGATAGGA AAAAGCGTTATAGCTTTGATTTTACGCTTAAAAATTTAGCCTTTGCTAAGATTAAAGAAAGTCTGCCTAGACATTTAAAT GATAAAGACTTAAAGAGCTTTTTAAAAACACTTTTAGACTATAAGCCAACCACTAGCTATGAAAAACGCAATAAATGTAT TTTACTCATTGTAATACTTGGGGGACTTAGAAAATGCGAAGTGTTAAACATAGAATTAAAACACATTCAAGTAGAAGAGC AAAATTACTCTATTTTAATTCAAGGTAAGGGTAGGAAAGAAAGAAAAGCTTATATAAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGATTATAGACTAAAATATTTTAATGGGGCATATCTTTTTAAAAAAGACAAACAAAAAGC ACAAAATTCTTTAACGCTTTATAACTTTATCCCCTTAATATTCAAACTAGCTCAAATCAAACACTATAAGCAATATGGCA CAGGCTTACATCTATTTAGGCATAGTTTTGCAACTCTTATTTATCAAGAAACCCAAGACTTAGTTTTAACTTCAAGGGCG TTAGGGCATAGCTCTTTACTCTCTACTAAGATTTATATCCATACTACCCAAGAGCATAACAAGAAAGTGGCTCTTGTATT TGATAGTTTGATAGAGAATAAAAAGTAA Protein sequence : MLNNKLTKSQRELFDNLKAFLYTKVKNFTPIQDVNDMAFILDTQDKILKCHNIEQLKQLCHILYNQGIKHTIMMQGLFLF FEYFRDNLKLRSFRTLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKKRYSFDFTLKNLAFAKIKESLPRHLN DKDLKSFLKTLLDYKPTTSYEKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDDYRLKYFNGAYLFKKDKQKAQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 6e-101 | 63 |
