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Name : HCD_05440 (HCD_05440) Accession : YP_006221300.1 Strain : Helicobacter cetorum MIT 99-5656 Genome accession: NC_017735 Putative virulence/resistance : Unknown Product : glutamate racemase Function : - COG functional category : - COG ID : - EC number : 5.1.1.3 Position : 1140418 - 1141185 bp Length : 768 bp Strand : + Note : COG0796 Glutamate racemase DNA sequence : ATGAAAATAGGCGTTTTTGATAGCGGTGTGGGTGGTTTTAGCGTTTTAAAAAGTCTTTTAAAGGCACAATTATTTGATGA GATTATTTATTATGGCGATACTGCTAGAGTGCCTTATGGCACTAAAGACCCCATAACTATCAAACAATTTGGCCTAGAAG CTTTAGATTTTTTCAAGCCACACAAAATTGAATTATTGATTGTGGCATGCAACACGGCGAGTGCTTTAGCCTTAAAAGAA ATGCAAGCACATTCAAAAATCTCTATTGTAGGTGTGATTGAGCCAAGTATTTTAGCTATCAAACAACAAATCAAAGATAA AGATGCCCCCATTTTAGTGCTAGGAACAAAAGCTACTATTCAGTCTAACGCTTATGATTATGCCCTAAAACAGCAAGGCT ATTCTAATCTTTCACATTTAGCCGCTTCTCTTTTTGTGCCTTTAATTGAAGAAGGCATTTTAGAAGGCGAGCTTTTAGAA ACTTGCATGCACTACTATTTTGCTCCATTAAGCGTTTTACCTAGGGCGATTATTTTAGGTTGCACGCATTTTCCTTTGAT AGCTAAAAAAATTGAGAGCTATTTTATGAAGCATTTTGCTCTCTCGCCCCCCCCCCTACTCATTCATTCTGGTGATGCTA TTGTAGAATATTTGCAACAACAATATGCCCTTAAAAAAAATTTATATGAATTTCCTAAAGTAGAATTTTTTGCAAGTGGC GATGTCGCATGGCTAGAAAAGCAAGCTAGAAAGTGGCTGAAACTCTGA Protein sequence : MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDTARVPYGTKDPITIKQFGLEALDFFKPHKIELLIVACNTASALALKE MQAHSKISIVGVIEPSILAIKQQIKDKDAPILVLGTKATIQSNAYDYALKQQGYSNLSHLAASLFVPLIEEGILEGELLE TCMHYYFAPLSVLPRAIILGCTHFPLIAKKIESYFMKHFALSPPPLLIHSGDAIVEYLQQQYALKKNLYEFPKVEFFASG DVAWLEKQARKWLKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glr | AAC44708.1 | Glr | Not tested | cag PAI | Protein | 1e-90 | 87 |
| glr | AAR03910.1 | glutamate racemase | Not tested | cag PAI | Protein | 3e-89 | 87 |
| glr | AAR03940.1 | glutamate racemase | Not tested | cag PAI | Protein | 3e-90 | 87 |
| HP0549 | NP_207344.1 | glutamate racemase | Not tested | cag PAI | Protein | 2e-90 | 86 |
| glr | AAR03971.1 | glutamate racemase | Not tested | cag PAI | Protein | 6e-90 | 86 |
| glr | AAR03882.1 | glutamate racemase | Not tested | cag PAI | Protein | 2e-90 | 86 |
| HP0549 | BAD13881.1 | - | Not tested | cag PAI | Protein | 6e-87 | 86 |
| murI | NP_223214.1 | glutamate racemase | Not tested | cag PAI | Protein | 1e-88 | 85 |
| HP0549 | BAD13991.1 | - | Not tested | cag PAI | Protein | 6e-90 | 85 |
