Gene Information

Name : HPB14_04100 (HPB14_04100)
Accession : YP_006219533.1
Strain : Helicobacter pylori HUP-B14
Genome accession: NC_017733
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein (cag11)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 846088 - 846744 bp
Length : 657 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGATACAACAGAACATCATGGAACCAATCCGCTGAACGCCCCACCACCTAGCAACTCACAGAGCAATGATCTCTT
AAATTTGCTAGACTCATTATATCCTAAAGGGAGTCTAGGGGAGCAAAGATTTCACGAAGCTTTAAAGAATCAAGAAGAGT
TGAAAAATATCCTAATAGAAATAGAAAAGCTACCGCAAGAAAAAAGGTATGAACTTCTGATGCAGATAGGACAAGCCAAA
CAAAGAATAATGGAAGCATATGCTCATTCATTCTTAGGATATATAGGGGGACTAGAGCATCTGTTAGGATTATGTATGGG
TGGGATATTTGTTTTGTTTGCAATCTATTTTGTATTTTTAAGAACTAGCAAAAACATGGAGCTAGTGGAAAGTCTAAAAA
CAAAACTAAAACTTCAGTATTTTTACTATGCCTTTGGTGTGGGTGCGGTTTTGTTTTTTGGATTAGAAACAATTAGATCT
ATTTATGAACTATATATCTTAGGAATTGGTAGCATTAACGACAAGGTGCTCTTTGTTTTGAAAAACATTTGCTTCATAGG
TATGGGCTATTTGATTTATAAAGTTATTAAGGTTATTGGTATAAAAAATTTTATCAATGGTCTTTTCACTTCAAAGAAAC
AAGGCGGTACAGAATGA

Protein sequence : 
MNDTTEHHGTNPLNAPPPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIEIEKLPQEKRYELLMQIGQAK
QRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFLRTSKNMELVESLKTKLKLQYFYYAFGVGAVLFFGLETIRS
IYELYILGIGSINDKVLFVLKNICFIGMGYLIYKVIKVIGIKNFINGLFTSKKQGGTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0531 NP_207327.1 cag pathogenicity island protein (cag11) Virulence cag PAI Protein 4e-81 99
HP0531 BAD13919.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-79 99
cagU YP_003728733.1 cag pathogenicity island protein U Virulence cag PAI Protein 2e-79 99
cagU AGC69798.1 cag pathogenicity island protein U Virulence cag PAI Protein 1e-79 99
cagU YP_005775734.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-79 98
HP0531 BAD13864.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-79 98
orf18 NP_223198.1 cag island protein Virulence cag PAI Protein 2e-80 98
HP0531 BAD14030.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-79 98
cag11 AAR03866.1 Cag11 Virulence cag PAI Protein 2e-79 98
HP0531 BAD13974.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-79 98
cag11 AAR03955.1 Cag11 Virulence cag PAI Protein 4e-79 98
HP0531 BAD14056.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-78 97
HP0531 BAD14002.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-78 97
cagU YP_005779059.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-78 97
HP0531 BAD13837.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-79 97
HP0531 BAD13892.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-78 97
cagU YP_005774538.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-78 97
cagU YP_005777275.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-78 97
HP0531 BAD13783.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-78 97
cag-U AAF80202.1 Cag-U Virulence cag PAI Protein 1e-78 97
cag11 AAR03894.1 Cag11 Virulence cag PAI Protein 9e-79 97
cag11 AAR03924.1 Cag11 Virulence cag PAI Protein 7e-79 97
HP0531 BAD13810.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-78 96
HP0531 BAD13947.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-78 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPB14_04100 YP_006219533.1 cag pathogenicity island protein (cag11) VFG0291 Protein 1e-81 99