Gene Information

Name : HPB14_03945 (HPB14_03945)
Accession : YP_006219508.1
Strain : Helicobacter pylori HUP-B14
Genome accession: NC_017733
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.1.3
Position : 810765 - 811532 bp
Length : 768 bp
Strand : +
Note : COG0796 Glutamate racemase

DNA sequence :
ATGAAAATAGGCGTTTTTGATAGCGGTGTGGGAGGGTTTAGCGTTTTAAAAAGCCTCTTAAAAGCGCAACTATTTGATGA
AATCATCTATTATGGCGATAGCGCTAGAGTGCCTTATGGCACTAAAGACCCCACCACGATCAAGCAATTTGGCTTAGAGG
CTTTGGATTTTTTCAAACCGCACCAGATTAAATTATTGATTGTAGCATGCAACACAGCAAGCGCTCTAGCTTTAGAAGAG
ATGCAAAAGCATTCCAAAATCCCTATTGTGGGCGTGATTGAGCCAAGCATTTTAGCGATCAAGCGGCAAGTGGAGAATAA
AAACGCCCCTATTTTGGTGCTAGGGACAAAAGCGACGATTCAATCCAACGCCTATGACAACGCCCTGAAACAACAAGGCT
ATTTGAACGTTTCGCATTTAGCCACTTCTCTTTTTGTGCCTTTGATTGAAGAAAGTATTTTAGAGGGTGAATTGTTAGAA
ACTTGCATGCGTTATTATTTCACTCCCTTAAAGATTTTACCTGAAGTGATTATTTTAGGTTGCACGCATTTTCCCTTAAT
CGCTCAAAAAATTGAGGGCTATTTTATGGGGCATTTTGCCCTTCCAACGCCCCCTCTACTCATCCATTCTGGCGATGCTA
TTGTTGAATATTTGCAGCAAAAATACGCCCTTAAAAAAAATACACACGCATTCCCTAAAGTGGAATTTCATGCGAGCGGC
GATGTGATCTGGCTAGAAAAACAAGCTAAAGAATGGCTCAAATTGTAA

Protein sequence :
MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHQIKLLIVACNTASALALEE
MQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEESILEGELLE
TCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKKNTHAFPKVEFHASG
DVIWLEKQAKEWLKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glr AAR03940.1 glutamate racemase Not tested cag PAI Protein 3e-101 98
glr AAC44708.1 Glr Not tested cag PAI Protein 1e-101 98
glr AAR03971.1 glutamate racemase Not tested cag PAI Protein 1e-99 96
HP0549 NP_207344.1 glutamate racemase Not tested cag PAI Protein 4e-100 96
glr AAR03910.1 glutamate racemase Not tested cag PAI Protein 1e-97 95
murI NP_223214.1 glutamate racemase Not tested cag PAI Protein 6e-99 95
glr AAR03882.1 glutamate racemase Not tested cag PAI Protein 2e-98 94
HP0549 BAD13991.1 - Not tested cag PAI Protein 5e-99 94
HP0549 BAD13881.1 - Not tested cag PAI Protein 3e-94 92