Gene Information

Name : HPB14_01535 (HPB14_01535)
Accession : YP_006219038.1
Strain : Helicobacter pylori HUP-B14
Genome accession: NC_017733
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 316969 - 317850 bp
Length : 882 bp
Strand : +
Note : COG0726 Predicted xylanase/chitin deacetylase

DNA sequence :
ATGGCAAAAGAAATTTTAGTGGCTTATGGCGTGGATATTGATGCGGTGGCTGGTTGGTTAGGGAGCTATGGTGGAGAGGA
TTCGCCTGATGATATTTCGCGCGGGCTTTTTGCGGGTGAAGTGGGGATCCCACGGCTTTTGAAATTGTTTAAAAAATACC
ATCTCCCTGCGACTTGGTTTGCACCGGGGCATTCTATTGAAACTTTTCCAGAGCAAATGAAAATGATCGTGGATGCAGGG
CATGAAGTGGGTGCGCATGGGTATTCGCATGAAAACCCTATCGCTATGAGCGCCAAGCAAGAAGAAGATGTTTTGTTAAA
AAGCGTTGAATTGATTAAAGATCTTACCGGCAAAGCCCCCACAGGCTATGTGGCACCGTGGTGGGAGTTTTCTAATATCA
CTAATGAATTGCTTTTAAAACACGGCTTCAAATACGACCACTCGCTCATGCACAATGATTTCACGCCCTATTATGTGCGC
GTGGGGGATAGTTGGAGCAAGATTGATTATAGTTTGGAAGCTAAGGATTGGATGAAGCCTTTAATCCGTGGGGTGGAAAC
CGATCTGGTGGAAATCCCTGCGAACTGGTATTTGGACGATTTACCGCCGATGATGTTCATCAAAAAGTCCCCCAATAGTT
TTGGTTTTGTAAGCCCGCATGATATAGGGCAAATGTGGATCGATCAATTTGATTGGGTTTATCGTGAGATGGATTATGCG
GTGTTTAGCATGACAATCCACCCTGATGTGAGCGCCCGTCCGCAAGTGTTGCTCATGCATGAAAAAATCATTGAGCATAT
CAACAAGCATAAGGGCGTGCGTTGGGTAACATTCAATGAAATCGCTGATGATTTCTTAAAACGAAACCCTAGAAAAAAAT
AG

Protein sequence :
MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIETFPEQMKMIVDAG
HEVGAHGYSHENPIAMSAKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYYVR
VGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPHDIGQMWIDQFDWVYREMDYA
VFSMTIHPDVSARPQVLLMHEKIIEHINKHKGVRWVTFNEIADDFLKRNPRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 1e-110 76