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Name : HPB14_07620 (HPB14_07620) Accession : YP_006220212.1 Strain : Helicobacter pylori HUP-B14 Genome accession: NC_017733 Putative virulence/resistance : Unknown Product : outer membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 1577759 - 1578574 bp Length : 816 bp Strand : + Note : COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen DNA sequence : ATGAATGCATTCAAGCGTATTATTAGTGTGGGGGTAATTGCTTTAGGTTTGTTTAACCTTTTAGACGCCAAACACCACAA AGAAAAAAAAGAAAACCACAAAATCACTCGTGAGCTTAAAGTGGGTGCTAACCCTGTGCCGCATGCGCAAATCTTGCAAT CAGTCGTGGACGATTTGAAGGAGAAAGGGATCAAATTAGTGATCGTGTCTTTTACGGATTATGTGTTGCCTAATTTAGCG CTCAATGACGGCTCTTTAGACGCGAATTACTTCCAGCACCGCCCTTATTTGGATCGGTTTAATTTGGACAGAAAAATGCA CCTTGTTGGTTTGGCCAATATCCATGTGGAGCCTTTAAGATTTTATTCTCAAAAAATCACAGACATTAAAAACCTTAAAA AAGGCTCAGTGATTGCCGTGCCAAATGATCCGGCCAATCAAGGCAGGGCGTTGATTTTACTCCATAAACAAGGCCTTATC GCTCTCAAAGACCCAAGCAATCTATACGCTACGGAGTTTGATATTGTCAAAAATCCTTACAATATCAAAATCAAGCCTTT AGAAGCCGCATTATTGCCTAAAGTTTTAGGGGATGTGGATGGGGCTATTGTAACAGGGAATTACGCCTTGCAAGCAAAAC TCACCGGAGCCTTATTTTCAGAAGACAAAGACTCGCCTTATGCCAATCTTGTAGCCTCTCGTGAGGATAACGCGCAAGAT GAAGCCATAAAAGCACTGATTGAAGCCTTACAGAGTGAAAAGACCAGGAAATTTATTTTGGATACCTATAAAGGGGCGAT TATCCCGGCTTTTTAA Protein sequence : MNAFKRIISVGVIALGLFNLLDAKHHKEKKENHKITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA LNDGSLDANYFQHRPYLDRFNLDRKMHLVGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPANQGRALILLHKQGLI ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLVASREDNAQD EAIKALIEALQSEKTRKFILDTYKGAIIPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 8e-35 | 41 |
