|
Name : HPB14_00520 (HPB14_00520) Accession : YP_006218842.1 Strain : Helicobacter pylori HUP-B14 Genome accession: NC_017733 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase Function : - COG functional category : - COG ID : - EC number : 4.4.1.8 Position : 106290 - 107432 bp Length : 1143 bp Strand : - Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases DNA sequence : ATGCACATGCAAACCAAATTAATCCATGGGGGCATTAGTGAAGACACGACAACGGGGGCGGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCACCATAAAGGCTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTG CTTTAGAAGAACTCATCGCTGATTTAGAGGGGGGGGTTAAGGGGTTTGCTTTTGCCTCTGGCCTAGCTGGAATCCACGCC GTTTTTTCCCTCTTGCAATCAGGCGATCATGTGTTATTGGGCGATGATGTTTATGGGGGGACTTTCCGCTTGTTTAATAA AGTGCTTGTCAAAAACGGGCTTTCTTGCACCATTATAGACACTAGCGATATATCCCAAATCAAAAAGGCTATCAAACCCA ACACCAAAGCCCTTTATTTAGAAACCCCTAGTAACCCCTTGCTTAAAATCACGGATTTAGCGCAATGCGCTAGTGTCGCT AAAGATCATAATTTGCTCACTATCGTGGATAACACCTTTGCCACCCCCTATTATCAAAACCCGCTTCTTTTGGGAGCGGA TATTGTGGTGCATAGCGGCACAAAATACTTAGGCGGTCATAGCGATGTGGTCGCTGGGCTTGTAACCACCAATAATGAAG CGTTAGCCCAAGAGATCGCTTTTTTCCAAAACGCTATCGGTGGGGTTTTAGGCCCTCAAGACAGTTGGCTGTTGCAAAGA GGGATTAAAACGCTGGGATTACGCATGCAAGCCCATCAAAAAAACGCCCTTTGCGTGGCTGAATTTTTAGAAAAACACCC TAAAGTGGAAAGGGTTTATTACCCGGGCCTACCCACCCACCCTAATTACGAGCTAGCCAAAGCCCAAATGCGTGGCTTTA GCGGGATGCTCTCTTTCACTCTCAAAAATGACAGCGAGGCGGCTCTTTTTGTAGAAAGCCTTAAATTATTCATTTTAGGC GAGAGTTTGGGCGGGGTGGAAAGCTTGGTGGGGATTCCAGCGTTTATGACCCATGCGTGTATCCCTAAAGAACAACGAGA AGCCGCAGGGATTAGAGATGGCTTGGTGCGCTTGTCTGTAGGGATTGAGCATGAACAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCGCTAAAATAGGCTAA Protein sequence : MHMQTKLIHGGISEDTTTGAVSVPIYQTSTYRQDAIGHHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSGDHVLLGDDVYGGTFRLFNKVLVKNGLSCTIIDTSDISQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVA KDHNLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR GIKTLGLRMQAHQKNALCVAEFLEKHPKVERVYYPGLPTHPNYELAKAQMRGFSGMLSFTLKNDSEAALFVESLKLFILG ESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-97 | 54 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 7e-99 | 54 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 2e-71 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPB14_00520 | YP_006218842.1 | cystathionine gamma-synthase | BAC0207 | Protein | 3e-63 | 44 |
