Gene Information

Name : S70_03790 (S70_03790)
Accession : YP_006215332.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 787046 - 788446 bp
Length : 1401 bp
Strand : +
Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

DNA sequence : 
ATGAATAGCACCAGGGAAAGAGATTTTATATTTAAAGAATTAAAAAGTATTTGTGATAAACACTATATTATTATTGTTGA
TTACAATCATAAAAGATTATCTATAGGTGTACCTAAAAAGCCAGATGACAATATACTTGCTACTTTACGTTTTATTGCTA
GCGTGCCGGTATGCTATGACATTTGGCCAAAAGAAAAGATTGATCATTACTTCAATAAAAAATATGAGGAGATCCAAGAG
CCAGAAACAAACTATCAACCTAATGGTGCCGAGCAGCTAGATACACGTTCACCCGCCGTCGATTTTGTAGAGAATATGCT
CAAAACAGCGGTAAGAAAACGCGCATCTGATATTCATATCGAACCATCAAAACAAGGGATAAAAATCCGTTTACGTGTAG
ATGGCAAGCTCTATTTTATTCCTTCACCACCTCTCGAAATCAATAATGAAATTATTGCTCGAATAAAAATAGTTGCCAAA
TTGAATATTGCAGAGAAGCGATTACCACAAGATGGGCAAATGAGTTGGCATTTCGAAGGGCATAATTACAGTATTCGCCT
GTCAACGATACCAACATTATATGGTGAAAAATTGGTTCTACGAATACTTAGCACCCAGCTAAAGTATTCTATAGAACAAA
TAGGGATGCACAATAATTTGCTATTAAGTTTAAAAAAAGAGCTATTGCAACCACAGGGCTTAATTCTTGTCACTGGCCCG
ACTGGCAGTGGGAAAACCGTCACGCTCTATAGTGCATTAGAGTATCTCAATCAATCTTCACGTAACATATCTACCATTGA
AGACCCTATTGAGATCCCACTATCTGGAATTAACCAAGTTCAAGTAAACGATAAATATGGCTTGAGTTTCGCTCACATAC
TAAGAGCCTTACTCCGGCAAGATCCTGATATTATCATGGTAGGAGAAATTCGAGATGAAGAAACGGCACAAATAGCAACC
AGAGCCGCACAAACAGGCCATTTAGTCTTATCAACTCTACATACCAATTGCACATTTAGCGCCATTGAAAGGATGGCGCA
ATTAGGTGTGAGTCAATCCCAACTGAGTTCTTGCTTAAAAATGGTGATTGCACAAAGGCTGGTACGCCGATTATGCCCAA
ACTGTAAAGTCACACACCCTAAAAATACACAAATTAGCGACAATAAAACGATAAAAGAGTGGTCATCCACGGGATGTGAT
CTCTGTTTTGCAGGGTTTATGGGGAGAACCGCCATATATGAGTATCTAGGGCAAGATGCACTGACTGAGATTTTTCAGCA
TGGAAAACAATGTATCACTCATTTTCAAACACTTTTTCAGGATGGATTGAACTTAATTGAAGCAGGTGAAACCACATTAC
AAGAGCTCTATGCTATTACAGGGACAGGGGAGATTATTTAA

Protein sequence : 
MNSTRERDFIFKELKSICDKHYIIIVDYNHKRLSIGVPKKPDDNILATLRFIASVPVCYDIWPKEKIDHYFNKKYEEIQE
PETNYQPNGAEQLDTRSPAVDFVENMLKTAVRKRASDIHIEPSKQGIKIRLRVDGKLYFIPSPPLEINNEIIARIKIVAK
LNIAEKRLPQDGQMSWHFEGHNYSIRLSTIPTLYGEKLVLRILSTQLKYSIEQIGMHNNLLLSLKKELLQPQGLILVTGP
TGSGKTVTLYSALEYLNQSSRNISTIEDPIEIPLSGINQVQVNDKYGLSFAHILRALLRQDPDIIMVGEIRDEETAQIAT
RAAQTGHLVLSTLHTNCTFSAIERMAQLGVSQSQLSSCLKMVIAQRLVRRLCPNCKVTHPKNTQISDNKTIKEWSSTGCD
LCFAGFMGRTAIYEYLGQDALTEIFQHGKQCITHFQTLFQDGLNLIEAGETTLQELYAITGTGEII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-66 41
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_03790 YP_006215332.1 hypothetical protein VFG0182 Protein 2e-64 43
S70_03790 YP_006215332.1 hypothetical protein VFG1876 Protein 2e-66 42
S70_03790 YP_006215332.1 hypothetical protein VFG1880 Protein 1e-67 42
S70_03790 YP_006215332.1 hypothetical protein VFG2048 Protein 3e-67 41