Gene Information

Name : S70_03250 (S70_03250)
Accession : YP_006215230.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 673831 - 675096 bp
Length : 1266 bp
Strand : +
Note : COG0582 Integrase

DNA sequence :
ATGCCTAAAAAAATAAAGCCCCTATCCCCTACGGCTGTAGCCAACGCAAAAGCTAAACCTAATCAGGCAGGGGAACTTAA
GGACACAATATTTCGAGACGGGGACGGATTAGAACTCCTCGCTAAAGTTTCGGGTTCTCGTCGTTGGTACTTTCGTTACT
ACAAGCCGCTTACACAAAAACGCACAATGATAGCAATTGGTGAATACCCTGCTATTGGATTAGCTGACGCCCGTAAAATC
AAAGATGAGTACAAATCATTACTGGCACAAAATATTGATCCTCTTGATTGGGGTAAACAGCAACAAGCTATAGCGCAAGA
GGAAAATAGTCATACTCTTGAAAAAGTTGCTACTCGCTGGATAGCCATTAAAAGAACGACTGTTACTCCCGACTACGCAA
ATGATGTATGGCGTTCACTCGAAAAAGATATTTTTCCAAAATTAGGTAAGATGCCAGTCTCTTTACTCAAAGCCCCTATG
CTGGTGGAAATATTAAAGCCTATTCAAGCAAGAGGAAATTTAGAGACAATAAAGCGCCTTACTCAACGCACAGTGGAAAT
AATGGACTTTGCTATGAATGCGGGGATTATTGATGCCAATCCGTTTACTACCGTTAGTAAGGCGTTTCCTAAGCCCAAGA
AAAAGCATAACCCGACCCTAAAACCCGATGAGCTTCCTCGACTAATGCGTGCGCTATCTGTTGCACAAATTGAATTATCA
ACACGCTTAGTTATTGAATGGCAATTACTAACAGTTACTCGACCAGGAGAAGCCGTACAAGCCCGTTGGTCTGAAATTGA
CTTTGATAACAAGCTTTGGAATGTGCCAGCTGAAACAATGAAGATGGGCCATGCACATACAATCCCATTAAACCAACCTG
CTCTCGATATCTTAGAAGTCATGAAACCTATTTCAGGCCACAGAGAATTTGTCTTTCCTCATCGTTCTGAACCTTCAAAA
TCGATGAATAGCCAAACAGCTAACATGGCCTTAAAACGTATGGGATTTGAAGGCTTACTAACAGCTCATGGAATGCGCGC
TATCGCCAGTACTGCGATGAACGAACAAGAGTTCATGCCTGATGCTATTGAAGCCGTGCTAGCCCATAGAGAGAAGAATT
CGGTACGTGCAGCCTATAACCGCTCAACTTATCTTGAACAACGAAAGGTTATTATGGATTGGTGGGGACAATTTGTTAAA
GGTGCTGCAACTGGTGATATGACAGCTGCAGAATGTATTAAGGGTTTACGGGTTGTTGGTGAATAA

Protein sequence :
MPKKIKPLSPTAVANAKAKPNQAGELKDTIFRDGDGLELLAKVSGSRRWYFRYYKPLTQKRTMIAIGEYPAIGLADARKI
KDEYKSLLAQNIDPLDWGKQQQAIAQEENSHTLEKVATRWIAIKRTTVTPDYANDVWRSLEKDIFPKLGKMPVSLLKAPM
LVEILKPIQARGNLETIKRLTQRTVEIMDFAMNAGIIDANPFTTVSKAFPKPKKKHNPTLKPDELPRLMRALSVAQIELS
TRLVIEWQLLTVTRPGEAVQARWSEIDFDNKLWNVPAETMKMGHAHTIPLNQPALDILEVMKPISGHREFVFPHRSEPSK
SMNSQTANMALKRMGFEGLLTAHGMRAIASTAMNEQEFMPDAIEAVLAHREKNSVRAAYNRSTYLEQRKVIMDWWGQFVK
GAATGDMTAAECIKGLRVVGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 8e-100 51
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 8e-100 51
int AAK20773.1 integrase Not tested VPI Protein 6e-100 51
int AAK20803.1 integrase Not tested VPI Protein 6e-100 51
unnamed AAA82714.1 integrase Not tested VPI Protein 6e-100 51
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 1e-96 47
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 5e-81 46
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 5e-81 46
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 6e-81 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_03250 YP_006215230.1 phage integrase VFG1092 Protein 2e-81 46