Gene Information

Name : S70_19260 (S70_19260)
Accession : YP_006218339.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : iron (chelated) ABC transporter periplasmic-binding protein yfea
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4023766 - 4024677 bp
Length : 912 bp
Strand : -
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence : 
ATGAAGAAAACACTATCTCTACTGTCTAAACCACTACTTTCTGCTGTCTTTGCTTTATCTACTATTTTACTAATCAGTCA
ACCTGCATTAGCTAAAAAGTTTAAGGTCGTCACAACTTTTACCATTATTCAAGATATCGCACAAAACGTCGCAGGGGATG
CCGCCGTTGTGGAATCGATAACCAAGCCTGGCGCTGAAATCCACGGCTACCAACCAACACCAAAAGATATCATGAAGGCC
TATGATGCCGACCTGATCTTATGGAATGGCTTAAACCTTGAAGTCTGGTTCCAACGCTTCTTTGAAAATTTCCAAAATGT
TCCTGCTGTTGTCGTCACTGAGGGGATTGACCCTATGCCAATTCGTGAAGGCGAATATAAGGGGAATCCGAACCCACACG
CATGGATGTCACCTGCAAACGCCCAAATTTATATCGAAAATATTCGCAAAGCATTGGTTAAGTATGATCCAGAAAACGCA
GAAATCTACAACCAAAATGCGAAAAAATATGCTGAACAGATTGCACAACTTGATGCTCCACTGCGTGAGCGACTCAACCG
TATCCCTGAAGAGAAACGTTGGTTAGTCTCAAGTGAAGGCGCTTTCAGCTACTTAACAAAAGATTATGGCTTTAAAGAAG
CTTATCTCTGGCCAATTAATGCGGAAGAACAAGGAACGCCACAACAAGTTAAAAATGTGATTGATACTGTACGTAAATAT
AATATCCCTGTGGTATTTAGCGAAAGTACAATTTCAGACAAACCAGCACGCCAAGTTAGTAAAGAAACTGGGGCAAAATA
CGGTGGAGTCCTTTATGTAGATTCACTATCAACCGCAGATGGCCCAGTACCAACCTATATCGAACTGTTAAATACAACCG
TTGACACTATAGCGAAAGGATTTGATCAGTAA

Protein sequence : 
MKKTLSLLSKPLLSAVFALSTILLISQPALAKKFKVVTTFTIIQDIAQNVAGDAAVVESITKPGAEIHGYQPTPKDIMKA
YDADLILWNGLNLEVWFQRFFENFQNVPAVVVTEGIDPMPIREGEYKGNPNPHAWMSPANAQIYIENIRKALVKYDPENA
EIYNQNAKKYAEQIAQLDAPLRERLNRIPEEKRWLVSSEGAFSYLTKDYGFKEAYLWPINAEEQGTPQQVKNVIDTVRKY
NIPVVFSESTISDKPARQVSKETGAKYGGVLYVDSLSTADGPVPTYIELLNTTVDTIAKGFDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-92 64
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-92 64
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-92 64
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-92 64
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-92 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_19260 YP_006218339.1 iron (chelated) ABC transporter periplasmic-binding protein yfea BAC0439 Protein 6e-103 78
S70_19260 YP_006218339.1 iron (chelated) ABC transporter periplasmic-binding protein yfea BAC0349 Protein 1e-92 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_19260 YP_006218339.1 iron (chelated) ABC transporter periplasmic-binding protein yfea VFG0525 Protein 1e-92 64