Gene Information

Name : S70_19250 (S70_19250)
Accession : YP_006218337.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein yfeC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4021987 - 4022877 bp
Length : 891 bp
Strand : -
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence : 
ATGATCGAGTTGTTACTGCAACCTTTCGAGTACAACTATATGGTTAAAGCCATTTGGGTAAGCGCTATTGTGGGTGCCGT
TTGTGCATTTCTTTCAGCTTACCTAATGCTCAAAGGTTGGTCATTAATGGGCGATGCCCTCTCTCATTCCGTTGTACCGG
GTGTTGCCGGAGCTTATGCGTTAGGCTTACCCTATGCCGCCGGCGCCTTTTTTACGGGGATCCTCGCGGCCCTAGCCATG
ACCTTTATTAAGCATATTACTCGGTTACGTGAAGATGCCGTTATCGGCTTTATCTTTTCAACTTTCTTTGCCGCGGGGCT
ATTAATCGTCTCTTTAAACCCAACCTCAGTGAATGTGCAAACCATCATTTTCGGTAATATTTTAGGTATCGCCGACGCCG
ATGTATTGCAGGTTGAAATTATTATCGCCATCTCCTTTATCGTGCTACTGGCTTTATGGAAGGATTTACTCGCCGTGTTC
TTTGATGAAAGCCACGCTCGTTCAATTGGCTTGAATCCATTGCGCTTAAAAATTATCTTTTTTACTCTACTAAGTGCTTG
TACGGTAGCTGCATTACAAACGGTTGGTGCAATCTTAGTTATTGCTATGGTGGTAACTCCCGGGGCAACAGCTTATCTAC
TCACTGACCAATTTAAGCGTTTATTAATCATTGCAGTCGCTATTGGTACTGCCACCAGCGCGATTGGTGCTTATGCCAGC
TATTTCCTCAATGGGGCAACTGGCGGCTTAATTGTGACGCTTCAAACGGTTATTTTCTTGTTGGCATTCTTCTTTGCGCC
AAAACACGGCATTTTTGCTTCTCGTCGTAAGGCAAAACAGGAAGTCGAGAACCTGCATAAAATAAAACAACAAGGAGCCT
CTAATGAGTGA

Protein sequence : 
MIELLLQPFEYNYMVKAIWVSAIVGAVCAFLSAYLMLKGWSLMGDALSHSVVPGVAGAYALGLPYAAGAFFTGILAALAM
TFIKHITRLREDAVIGFIFSTFFAAGLLIVSLNPTSVNVQTIIFGNILGIADADVLQVEIIIAISFIVLLALWKDLLAVF
FDESHARSIGLNPLRLKIIFFTLLSACTVAALQTVGAILVIAMVVTPGATAYLLTDQFKRLLIIAVAIGTATSAIGAYAS
YFLNGATGGLIVTLQTVIFLLAFFFAPKHGIFASRRKAKQEVENLHKIKQQGASNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-77 66
sitC NP_461784.1 permease Virulence SPI-1 Protein 3e-77 66
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-77 66
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-77 66
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-77 66
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 5e-41 41
sitD NP_461785.1 permease Virulence SPI-1 Protein 7e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_19250 YP_006218337.1 chelated iron transport system membrane protein yfeC BAC0441 Protein 2e-95 85
S70_19250 YP_006218337.1 chelated iron transport system membrane protein yfeC BAC0351 Protein 1e-77 66
S70_19250 YP_006218337.1 chelated iron transport system membrane protein yfeC BAC0352 Protein 3e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_19250 YP_006218337.1 chelated iron transport system membrane protein yfeC VFG0527 Protein 1e-77 66
S70_19250 YP_006218337.1 chelated iron transport system membrane protein yfeC VFG0528 Protein 3e-41 41