Gene Information

Name : S70_19245 (S70_19245)
Accession : YP_006218336.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein Yfed
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4021128 - 4021994 bp
Length : 867 bp
Strand : -
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence : 
ATGAGTGATTTTATTGACTTACTAACGGCACCGTTTATTTTCCCGTTTATGCAGAAAGCGATTATTACGGCTATCGTGAC
AGGTGCAGTCTGTGCGATTTTATCTTGCTTTTTAGTGCTTAAAGGCTGGTCATTAATGGGGGATGCCATCTCCCATGCTG
TATTACCGGGGATTGTTATTGCTTCTGTTGCGGGTATACCACTCGCTATTGGGGCATTTGTTTCGGGCCTGTTTTGTGCA
TTTGCCACCGGATACCTCAAAGAGAATAGTCGTATCAAAGAAGATACCGTGATGGGAATTGTCTTTTCAGGCATGTTCGC
CGTCGGCTTAGTGATGTTTGCCAAAATCGATACCGAGCAGCATCTTACTCATATCCTATTTGGGGATATTCTTGGTATTA
CCGATGCCGAATTTAAGCAAAACCTATGGTTTGCAGGCATTACCATCGCTATTATCTTACTAAAACGTAAAGATTTTATG
CTGTATTGCTTTGATCCTAATCAAGCGCGTGTGATTGGCCTGCCTGTGAAGTTGATCCATTATGGTCTGCTCTCATTGCT
CGCCCTTACCATTGTCGCCTCGCTTCAAGCGGTTGGGATCATCTTAGTCATTGCGATGCTTATCTCCCCAGGCATCATCG
CTTTTGTCCTGTGTCGAAGCTTTGGGTGGATGCTCTTTGTGGCCGTGATTGCCTCCGTCACCTCTAGTGTGATTGGAACC
ATTGTCAGTTTCCACATTGACGGTGCTACAGGCCCTTGTATTGTTATTACTCAAGCCATCTACTTCATCATTGCCCTGCT
CTATAGCAAAATGGTCTTAGCGCGTAAAAAAGCGAAATTGCCGCAAGAAAAGTTACAGTCGGCCTAA

Protein sequence : 
MSDFIDLLTAPFIFPFMQKAIITAIVTGAVCAILSCFLVLKGWSLMGDAISHAVLPGIVIASVAGIPLAIGAFVSGLFCA
FATGYLKENSRIKEDTVMGIVFSGMFAVGLVMFAKIDTEQHLTHILFGDILGITDAEFKQNLWFAGITIAIILLKRKDFM
LYCFDPNQARVIGLPVKLIHYGLLSLLALTIVASLQAVGIILVIAMLISPGIIAFVLCRSFGWMLFVAVIASVTSSVIGT
IVSFHIDGATGPCIVITQAIYFIIALLYSKMVLARKKAKLPQEKLQSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-61 53
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-61 53
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-61 52
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-61 52
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-61 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_19245 YP_006218336.1 chelated iron transport system membrane protein Yfed BAC0442 Protein 2e-92 72
S70_19245 YP_006218336.1 chelated iron transport system membrane protein Yfed BAC0352 Protein 8e-62 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_19245 YP_006218336.1 chelated iron transport system membrane protein Yfed VFG0528 Protein 7e-62 53