Gene Information

Name : S70_18345 (S70_18345)
Accession : YP_006218162.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3855564 - 3856307 bp
Length : 744 bp
Strand : -
Note : COG1338 Flagellar biosynthesis pathway, component FliP

DNA sequence : 
ATGTTTTCTGTGAAATCCCCAGCAATGATCGCTTCGTTATTATTGATGCTGCCTATGCAAGCTCTAGCATCATTACCACC
TGTAATCAGTCGAACATTACCCGATGGTGGGCAAAGTTGGTCGTTACCTGTCCAAACCTTACTTTTTCTAACATTGCTGG
GTTTTATCCCTGCACTGTTATTGATGATGACAAGTTTTACGCGCATTATCATTGTGCTAGGTTTGCTGCGTAATGCGCTT
GGAACCCCTTCTGCACCACCAAACCAAGTACTATTAGGCCTTGCGTTATTTCTCACATTTTTTGTGATGTCGCCTGTTGC
CGACCAAGCCTATCGTGAAGCTTATCAGCCATTTAGTGAAGATAAAATCAGTTTAGAAACCGCTTTAGAACGCGGCACAG
CCCCCTTTCGTACTTTTATGTTAGGGCAAACTCGAGAAAGTGATTTGGCTCTTTTTGCACGCATTGCCAAAGTCGGTGAG
ATCCAAGAGGCAAAAGATGTTCCAATGCGGATTTTAGTACCTGCATTTATCACTAGCGAACTAAAAACCGCATTCCAAAT
TGGTTTCACTATTTTCATTCCATTTCTGATCATTGACTTAGTGGTTGCCAGTGTCTTGATGGCGCTTGGGATGATGATGG
TACCACCCGCAACTGTCTCTTTACCGTTCAAATTAATGCTTTTTGTTCTGGTTGATGGATGGCAATTATTACTCGGCTCT
TTATCACAAAGTTTTTTTAATTAA

Protein sequence : 
MFSVKSPAMIASLLLMLPMQALASLPPVISRTLPDGGQSWSLPVQTLLFLTLLGFIPALLLMMTSFTRIIIVLGLLRNAL
GTPSAPPNQVLLGLALFLTFFVMSPVADQAYREAYQPFSEDKISLETALERGTAPFRTFMLGQTRESDLALFARIAKVGE
IQEAKDVPMRILVPAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATVSLPFKLMLFVLVDGWQLLLGS
LSQSFFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 6e-32 45
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-32 45
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-32 45
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-32 45
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 3e-33 45
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 3e-33 45
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-32 45
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 6e-32 45
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-31 44
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-28 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 8e-25 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 8e-25 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 8e-25 42
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 2e-26 42
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 2e-26 42
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 1e-26 42
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-29 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-29 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-24 41
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 6e-26 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 6e-26 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 3e-19 41
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 5e-26 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 2e-30 41
escR CAI43889.1 EscR protein Virulence LEE Protein 2e-30 41
escR AAC31528.1 L0049 Virulence LEE Protein 2e-30 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 2e-30 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 2e-30 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 2e-30 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 2e-30 41
escR AAK26700.1 EscR Virulence LEE Protein 2e-30 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 2e-30 41
escR AAL57527.1 EscR Virulence LEE Protein 2e-30 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_18345 YP_006218162.1 flagellar biosynthesis protein FliP VFG2338 Protein 4e-69 76
S70_18345 YP_006218162.1 flagellar biosynthesis protein FliP VFG0188 Protein 3e-32 46
S70_18345 YP_006218162.1 flagellar biosynthesis protein FliP VFG0394 Protein 1e-31 44
S70_18345 YP_006218162.1 flagellar biosynthesis protein FliP VFG0044 Protein 3e-32 43
S70_18345 YP_006218162.1 flagellar biosynthesis protein FliP VFG0519 Protein 7e-27 42
S70_18345 YP_006218162.1 flagellar biosynthesis protein FliP VFG0827 Protein 9e-31 41