Gene Information

Name : S70_17360 (S70_17360)
Accession : YP_006217973.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Unknown
Product : CPS-53 (KpLE1) prophage, Sf6-like integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3661221 - 3662432 bp
Length : 1212 bp
Strand : +
Note : COG0582 Integrase

DNA sequence : 
ATGAAGCTAACCGTTAAACAAATTGATTCCAGTAAGCCTAAAGAAAAAGACTACAAACTATCTGATGGTGGTGGACTGTA
TCTATTGGTTAAAACTAATGGCGGAAAGTATTGGCGGTTAAAATACCGAATCGATGGTAAAGAGAAACTTTTAGCTATTG
GAGTTTATCCAACCGTTACACTGGCTGATGCCAGAAGAAAGCGTGATGATGCAAAGAGATTGCTGGCGGATGGAATTGAC
CCAAACCAACAACGCAAAGAACAAAAGCAAGCCTCAAAGATTGACAGTGTAAACACCTTTAAAAATATTGCCCTTGAATG
GTATGAGGGAAGAAAGGATCGCTGGTCTGTTGGTTATCGTGATGACATGATGGACGCATTCGAAAAAGATGTATTTCCTT
ATATAGGTAATCGCCCGATTGCTGAAATCAAACCAATGGAACTACTCGAAGTGCTTTCTATTATGGAAAAGCGCGGAGCA
ACCGAGAAGCTAAAGAAAGTGCGTCAACGTTGTGGCGAGGTATGGAAGTACGCCATTATTACTGGTAGGGCAGAGTATAA
CCCTGCACCAGATTTAGCCAGTGCCTTTGTTCCTCATAAGCGTGAGCACTACGCCCATCTTTCAGTAAGTGAATTACCAG
ATTTTCTTTCTTCTATAGATAAGTATATGGGAAGCCAGATTGTTAGAGTGGCACTGAGGGTACTTATTTTAACTGGAGTT
CGACCAGGCGAATTGAGAAAGGCGGAATGGTCAGAAATTAACTTTGATACTAAGATTTGGGAAATACCAGCTGAAAAAAT
GAAGATGCGCCGCCCTCACATTGTGCCGCTATCAGAGCAGGTTATTGATTTGCTGAGGCAGATACACCCCATCAGTGGCA
GTTATCAATATATATTCCCTAGCCGCACTGATTATAGAAAACATATATCAGATATGGCACTGAATACGATGATTAGGCGC
ATGGGTTACAGTGGCAGAGCCACAGGTCACGGATTCAGACATACAATGAGCACCATCCTACACGAACAGGGCTACAACAC
TGCATGGATTGAGACACAGTTAGCGCACGTTGATAAAAACTCTATTCGTGGAACGTATAACCATGCTCAGTATATTGATG
GACGTAGAGAAATGCTTCAATGGTACGCTGATTACATGGGAGCATTAGAGAACGGGGATAATGTTGTCCACGGCAATTTT
AAACGCGCTTAA

Protein sequence : 
MKLTVKQIDSSKPKEKDYKLSDGGGLYLLVKTNGGKYWRLKYRIDGKEKLLAIGVYPTVTLADARRKRDDAKRLLADGID
PNQQRKEQKQASKIDSVNTFKNIALEWYEGRKDRWSVGYRDDMMDAFEKDVFPYIGNRPIAEIKPMELLEVLSIMEKRGA
TEKLKKVRQRCGEVWKYAIITGRAEYNPAPDLASAFVPHKREHYAHLSVSELPDFLSSIDKYMGSQIVRVALRVLILTGV
RPGELRKAEWSEINFDTKIWEIPAEKMKMRRPHIVPLSEQVIDLLRQIHPISGSYQYIFPSRTDYRKHISDMALNTMIRR
MGYSGRATGHGFRHTMSTILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYIDGRREMLQWYADYMGALENGDNVVHGNF
KRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int CAC39282.1 integrase Not tested LPA Protein 1e-121 63
aec33 AAW51716.1 Int Not tested AGI-3 Protein 8e-122 63
int AAD44730.1 Int Not tested SHI-2 Protein 7e-120 63
int AAC31482.1 CP4-like integrase Not tested LEE Protein 3e-121 63
int ACU09430.1 integrase Not tested LEE Protein 3e-121 63
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 4e-121 63
ECs4534 NP_312561.1 integrase Not tested LEE Protein 4e-121 63
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 9e-120 63
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 9e-120 63
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 6e-120 63
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 6e-116 60
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 2e-115 57
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 3e-62 41
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 2e-67 41
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 2e-67 41
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 5e-67 41
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 1e-66 41
int AAL51003.1 CP4-like integrase Not tested LEE Protein 4e-67 41
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 4e-67 41
int AAK16198.1 Int Not tested PAI-I AL862 Protein 3e-67 41
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 3e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_17360 YP_006217973.1 CPS-53 (KpLE1) prophage, Sf6-like integrase VFG0783 Protein 2e-121 63
S70_17360 YP_006217973.1 CPS-53 (KpLE1) prophage, Sf6-like integrase VFG0598 Protein 4e-120 63
S70_17360 YP_006217973.1 CPS-53 (KpLE1) prophage, Sf6-like integrase VFG0626 Protein 7e-68 41