Gene Information

Name : S70_14365 (S70_14365)
Accession : YP_006217395.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : periplasmic fimbrial chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3050829 - 3051593 bp
Length : 765 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence :
ATGAAACTGAATAAAAAATACGCTTTGATAGCGGGTGTGATGGGCATGATGTGGTTAAGCAGCATGGCACACGCGGCGAT
TGGTCTTGACCGTACTCGGGTGATTTTTAATGGTGACCAAAAATCGATGTCACTCAACATTTCTAACAACAATAAACAAT
TACCGTATCTAGCACAGGCGTGGATTGATGATGCTGAAGGCAACAAAATTACGTCGCCATTGGTGGTATTGCCGCCAGTG
CAGCGTGTGGAGCCCGGCAAATCTAGCCAAGTGAAAATCGAAGCCCTGCCAGCGGTTAGTACCTTGCCACAAGATCGCGA
GAGCTTGTTTTACTTTAACTTGCGTGAAATACCGCCTAAAAGCGATAAGCCCAACACGTTACAGATTGCCTTACAAACCC
GCGTAAAAATGTTCTATCGACCAAAAGCGATTGTGCCGGCCAAAATGGGCACACCATGGCAAGAAAAATTAACCCTGCAA
AAACAAGGCGATACGGTAATGGTCAAAAATCCCACGCCGTATTATGTGACAGTGATTAATGCAGCAGAAAGCCTTAAGGC
ATTGGACAACAAAGATAAAAAAGAATTTAAACCCATCATGTTGCCACCGTTTGGTGAAAGCGCGTTGGGGGTGAGTGCCA
ATGCATTAGGGCAGCGTCCGGTCGTGACTTACATCAATGATTACGGCGGGCGTCCAAACTTGACCTTCCAATGTCAAGGT
AGCCAATGTCACGTGGTACCGAACGATAAGCCTGCGACACCGTAA

Protein sequence :
MKLNKKYALIAGVMGMMWLSSMAHAAIGLDRTRVIFNGDQKSMSLNISNNNKQLPYLAQAWIDDAEGNKITSPLVVLPPV
QRVEPGKSSQVKIEALPAVSTLPQDRESLFYFNLREIPPKSDKPNTLQIALQTRVKMFYRPKAIVPAKMGTPWQEKLTLQ
KQGDTVMVKNPTPYYVTVINAAESLKALDNKDKKEFKPIMLPPFGESALGVSANALGQRPVVTYINDYGGRPNLTFQCQG
SQCHVVPNDKPATP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 1e-57 54
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 5e-57 54
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 4e-57 54
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 7e-57 54
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 7e-57 54
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 5e-57 54
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 7e-50 53
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-57 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_14365 YP_006217395.1 periplasmic fimbrial chaperone VFG0896 Protein 3e-57 54
S70_14365 YP_006217395.1 periplasmic fimbrial chaperone VFG0885 Protein 3e-50 53
S70_14365 YP_006217395.1 periplasmic fimbrial chaperone VFG1547 Protein 8e-58 53