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Name : S70_14360 (S70_14360) Accession : YP_006217394.1 Strain : Providencia stuartii MRSN 2154 Genome accession: NC_017731 Putative virulence/resistance : Virulence Product : fimbrial outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 3048224 - 3050749 bp Length : 2526 bp Strand : + Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGTCTTCACCAAAGGCTACTTATTTTCGCCTTGCATTGCTGTCGCTGTCCATTGCGTTTGCTTTGGGTGAAAGCCAGAT AGCATTGGCATCATCTGATGTTATCCAATTCAATATGGATGTATTGGATGTGGAAGACAAAAAAAATATCAATCTAGAAC ATTTTTCGCGTGCTGGTTATGTGATGCCAGGAACCTATAGCTTAGCGCTTAAGGTCAATGACGATACGTTACCAGAAGTG AAAGTACCATTTTATCCCCCTGAGAATGATCCTCAAGGCAGTGAGCCGTGCTTATCACCCGATATCACTGCCCAATTAGG GCTGACCGCAGACAGCTTGAAAAAGCTGACATGGTGGCACGATGACCAATGCTTAAATTTGGAAAGTTTGCCGGGAATAC AGGTGCGTGGGGATCTCTCAACTTCATCCTTATACGTGAGTATTCCACAAGCTTACATGGAGTATACGGCTCCTAATTGG GATCCACCATCGCGTTGGGATGAAGGGATTGCTGCGATTTTGTTGGATTACAACATTAACGGTAACACTTATCGCCCGCA CAACAAAGGTCATAATACCTACACCTTAAACGGTAACGGGGTGGCGGGGGTAAACTTAGGTGCATGGCGTTTTCGTGCAG ATTGGCAAGGCCGTTTAAATCATGCAACAGGCTCAAACCAAGCTATCAATCGTGATTTTCAATGGAATCGATTTTACGCC TTTCGTGCGCTGCCGGCTCTCGGAGCCAAACTGATTTTGGGTGAAGATTACCTGAACTCAAATATGTTTGATTCATTCCG TTTTATTGGCGCCAGTTTGCGCTCGGATTTGAACATGTTGCCGCCGAATTTACGCGGTTACGCACCGGAAGTAACAGGGA TCGCACAATCCAATGCGACGGTGACGATAAGCCAGCAAGGGCGTGTGATTTATACCGAACAAGTGGCACCGGGGCCGTTT CGTATTCAAAACTTGAGCGATGCGATTAGTGGTACGTTGGACGTCAAAATTGAAGAGCAAGATGGTACGGTACAAGAGTA TCAACTCGATACAGCTAACTTACCTTACCTAACTCGTCCGGGACAGCTTCAATATAAGTTGGCATTGGGTCAGCCGAATG ATGTTAACCGGCACAAAGAGGGTGATAACTTTATCACTGGTGAGTTTTCGTGGGGGGTGAATAACGGTTGGTCACTGTTC AGTGGTTTGCTTGGCAGCAAAAACTACCAAGCGATTTCAGCGGGTATTGGTCGAGACTTACTGGCGTTCGGTGCGTTGTC ATTCGATGTGACTCAGTCGTTTGCGCGTTTGGCAGGTGAAAACACTATTAACGGTGGATCTTATCGTGTCAGCTACGCAA AACGTTTTGATGCTATTGATAGTCAAATTCAATTCGCGGGTTATCGCTTCTCGGAGCGAGACTTTATGAGTATGTCAGAC TTCTTACAGGCAAGGAAAACAGGTATTCGTTATGGTGGTAGCAAAGAGCTGTACACCATTTCACTGAGCAAAAATTTCCG TGATATCGGTATGTCTGTATATTTGAACTACAACCACCAAACCTATTGGGATCGACCGGAAAACAACTATTACAGCCTGA CGTTATCCAAATATTTTGATGTGGGAACGATTAAGAATGTCAGCGTTAACCTGTCGGCAAACCGCAGTATGTATAACGGA GTGACGGATGACAGTATTTATTTATCGACCTCATTCCCGCTGAGTAATGGTGCTAATGTGGGGTATTCCTTAAATAGCAG CCGTTACGACACGGTCAATCGAGTGACTTACCATGACCGCATTGATGAGCGTACCAATTATCAATTGGGCGTAGGATCAA ACCGTAAAGGAGCGAGTGGAACTGCGTATCTGACTCACCAAGGCGATACCGCGCGAGTCTCGGGTAATGCGAGTTACGCC AATAACCAATATACCGCGTTTGGGTTAGCAGCAACTGGTGGGATCACGCTGACGGCAGAAGGTGGTGGTGTACATCGCAT GAGCATACCTGGAGGAACCCGTTTACTGGTGGACACCGATGGTATTGCTAATGTGCCTGTCAAAGGGTTTGGAGCTCCGG TTACCACCAATATGTTTGGTAAAGCGGTGGTTGGTGACATGAACAGTTACTACCGCAGCAAGGCACAAATTGACTTGAAC GCGCTGCCAGATGATGTGGATGCACAGCAATCGGTGGTGCAAGTGACCTTAACCGAAGGGGCGGTGGGTTACCGCGAATT TGCGGTTGTAGCAGGGCAAAAAGCGATGACGGTGTTGCGCTTACCGGATGGCAGTTACCCTCCGTTTGGGGCGCAAATAT TCAATACAAAAGGCCAAAGCACCGGCATCGTAGGGGATAGCGGCAGTGCGTATATCAGCGGTATTGAACCAAATTCCCTA ATGACCATACAGTGGGGAGACGAGGACGGATGCCAAGTGGCTTTCCCTGAGAGTATCGATATCAACAATCCATCGCTGTT GTTGCAGTGTACTCCGCTAGCAGCAAAGCAGTTAGCGCAGCGATAA Protein sequence : MSSPKATYFRLALLSLSIAFALGESQIALASSDVIQFNMDVLDVEDKKNINLEHFSRAGYVMPGTYSLALKVNDDTLPEV KVPFYPPENDPQGSEPCLSPDITAQLGLTADSLKKLTWWHDDQCLNLESLPGIQVRGDLSTSSLYVSIPQAYMEYTAPNW DPPSRWDEGIAAILLDYNINGNTYRPHNKGHNTYTLNGNGVAGVNLGAWRFRADWQGRLNHATGSNQAINRDFQWNRFYA FRALPALGAKLILGEDYLNSNMFDSFRFIGASLRSDLNMLPPNLRGYAPEVTGIAQSNATVTISQQGRVIYTEQVAPGPF RIQNLSDAISGTLDVKIEEQDGTVQEYQLDTANLPYLTRPGQLQYKLALGQPNDVNRHKEGDNFITGEFSWGVNNGWSLF SGLLGSKNYQAISAGIGRDLLAFGALSFDVTQSFARLAGENTINGGSYRVSYAKRFDAIDSQIQFAGYRFSERDFMSMSD FLQARKTGIRYGGSKELYTISLSKNFRDIGMSVYLNYNHQTYWDRPENNYYSLTLSKYFDVGTIKNVSVNLSANRSMYNG VTDDSIYLSTSFPLSNGANVGYSLNSSRYDTVNRVTYHDRIDERTNYQLGVGSNRKGASGTAYLTHQGDTARVSGNASYA NNQYTAFGLAATGGITLTAEGGGVHRMSIPGGTRLLVDTDGIANVPVKGFGAPVTTNMFGKAVVGDMNSYYRSKAQIDLN ALPDDVDAQQSVVQVTLTEGAVGYREFAVVAGQKAMTVLRLPDGSYPPFGAQIFNTKGQSTGIVGDSGSAYISGIEPNSL MTIQWGDEDGCQVAFPESIDINNPSLLLQCTPLAAKQLAQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 2e-173 | 47 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-165 | 46 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 2e-165 | 46 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 2e-165 | 46 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 2e-165 | 46 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 9e-164 | 45 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 7e-164 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S70_14360 | YP_006217394.1 | fimbrial outer membrane usher protein | VFG1548 | Protein | 1e-165 | 46 |
| S70_14360 | YP_006217394.1 | fimbrial outer membrane usher protein | VFG0884 | Protein | 8e-166 | 46 |
| S70_14360 | YP_006217394.1 | fimbrial outer membrane usher protein | VFG0895 | Protein | 9e-166 | 46 |
