Gene Information

Name : S70_13190 (S70_13190)
Accession : YP_006217171.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2818814 - 2819617 bp
Length : 804 bp
Strand : -
Note : COG4584 Transposase and inactivated derivatives

DNA sequence :
TTGTTTGATGAACTCTGTCAAAGAGGCTATCAAGGCGGGATTGCCCAATTGCGTCGTTTCGTTTGCCAGTTTAAACCCAT
TATCGCGCCTGAACCTATTGTGCGGTTTGAAACGCCTCCCGGCCAGCAGATGCAGATTGATTTCACCACTATTCGTCGAA
GTAAACAGACGTTAAAAGCATTCGTGGCGACATTAAGCTATTCCCGCGCTTGTTACGTTAAGTTCTTTGATAATGAACGA
GCCAGCGCTTGGCAACAGGGTTTAAAAGAAGCGTTCGATTACTTTGGCGGCGTGCCTCAACAAGTTCTTTGTGATAACGC
AAAAACCCTGATTGTCAAGCGAGATGCCTATGCAGAAGGTGAGCATAAACTGCATGTGGAAATGCTTCAGATGTCAAAAG
ATTATGGCTTTAAGTTGACCGCTTGCCAGCCTTATCGGGCCAAAACGAAAGGCAAAGTCGAGCGTTTTAACCATTACCTA
AAAAATAGCTTTATCGTGCCACTTAAGGCGGAACTTCGGGCTCAGAACCTTGAGTTGGATGTTGAAATAGCGAACGCAAA
AATTGGCCCATGGCTACAGCGCATTGCCCATCAATGGCGTCATGGCACTACGCAAGAGAAACCGGCTGATAGACTTGTTG
ACGAAGTCAAGTTTCTTCAACCTTTACCGGCAGTCGTTGAGCATGTCATCTCGACAGGGTCTTCCCTGAATATACCCGTC
GTTCCACCACATGGATCCGTTAATTTACAACACCCAATCAAAGTCTATGATGCGCTGTTAGAGGAAAATTATGTTACTGC
ATGA

Protein sequence :
MFDELCQRGYQGGIAQLRRFVCQFKPIIAPEPIVRFETPPGQQMQIDFTTIRRSKQTLKAFVATLSYSRACYVKFFDNER
ASAWQQGLKEAFDYFGGVPQQVLCDNAKTLIVKRDAYAEGEHKLHVEMLQMSKDYGFKLTACQPYRAKTKGKVERFNHYL
KNSFIVPLKAELRAQNLELDVEIANAKIGPWLQRIAHQWRHGTTQEKPADRLVDEVKFLQPLPAVVEHVISTGSSLNIPV
VPPHGSVNLQHPIKVYDALLEENYVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33718.1 hypothetical protein Not tested PAI I 536 Protein 1e-36 41
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 2e-45 41
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 2e-45 41
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-45 41
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 3e-45 41
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 2e-45 41
y2411 NP_669718.1 transposase Not tested HPI Protein 3e-45 41
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 3e-45 41
unnamed CAA21403.1 - Not tested HPI Protein 3e-45 41
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 3e-45 41
api83 CAF28557.1 transposase Not tested YAPI Protein 3e-45 41
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 3e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_13190 YP_006217171.1 integrase catalytic subunit VFG1459 Protein 6e-37 41
S70_13190 YP_006217171.1 integrase catalytic subunit VFG1626 Protein 1e-45 41
S70_13190 YP_006217171.1 integrase catalytic subunit VFG1607 Protein 1e-45 41
S70_13190 YP_006217171.1 integrase catalytic subunit VFG1461 Protein 2e-45 41
S70_13190 YP_006217171.1 integrase catalytic subunit VFG1514 Protein 1e-45 41