|
Name : S70_13120 (S70_13120) Accession : YP_006217157.1 Strain : Providencia stuartii MRSN 2154 Genome accession: NC_017731 Putative virulence/resistance : Virulence Product : MrfD protein Function : - COG functional category : - COG ID : - EC number : - Position : 2810127 - 2810903 bp Length : 777 bp Strand : + Note : COG3121 P pilus assembly protein, chaperone PapD DNA sequence : ATGTTACAGAGCAATAAAATCAATAAAAGAAATCATCATCCTATTGCCACTTTTTTGGTTGGAGCGATGTTGATATCTAC GACACTGTCTTCCGCACAAGCTGCAATCGCTTTAGATCGCACTCGTGCAATTATGACGGGTGAAGATAAATCCATTAGCT TAAATATCAGTAATGAAAATAAGCAATTACCTTATTTAGCACAAGGTTGGATTGAAAATGCCCAAGGTGAAAAAATCACG GAGCCCTTTACAGTATTACCTCCCGTTCAGCGTGTTGAGCCTGGCGCTAAAAGCCAAGTAAAAATTCAAGCACTGCCGAG TGTCGCGTCACTGCCGCAAGACAGGGAGTCCGTTTATTATTTCAATTTACGTGAAATCCCACCTAAGAGTGATAAACCCA ACACACTTCAGTTGGCGTTACAAACGCGAATTAAGTTGTTTTATCGCCCAAAAGCGATTATTCCAACTCGCCAACAGATG GAAAATCCATGGCAAGAAAAAATCACACTTACTCGTCAAGGTGATCAATACAGTGTAGAGAATCCAACGCCATATTTTGT AACGCTTGTTGATGCCGCTTCAGTGAAAGACGGAAAAACAGTTGCGGGATTTGAACCGTTGATGGTTGCTCCTAAAAGCA GTTTGCTCATGGGCGGAAGTGCAAAAGCTTTAGGCAGTAAGCCTGTACTCACATATATCAATGACTACGGTGGACGACCA ACGTTGACATTTACTTGTCAAGATAATCGCTGTCATGTGGTATCAGATAAACAGTAA Protein sequence : MLQSNKINKRNHHPIATFLVGAMLISTTLSSAQAAIALDRTRAIMTGEDKSISLNISNENKQLPYLAQGWIENAQGEKIT EPFTVLPPVQRVEPGAKSQVKIQALPSVASLPQDRESVYYFNLREIPPKSDKPNTLQLALQTRIKLFYRPKAIIPTRQQM ENPWQEKITLTRQGDQYSVENPTPYFVTLVDAASVKDGKTVAGFEPLMVAPKSSLLMGGSAKALGSKPVLTYINDYGGRP TLTFTCQDNRCHVVSDKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 1e-58 | 51 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 3e-58 | 51 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-58 | 51 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 3e-58 | 51 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 3e-58 | 51 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 3e-58 | 51 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 5e-60 | 51 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 2e-51 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S70_13120 | YP_006217157.1 | MrfD protein | VFG1547 | Protein | 8e-59 | 51 |
| S70_13120 | YP_006217157.1 | MrfD protein | VFG0896 | Protein | 1e-58 | 51 |
| S70_13120 | YP_006217157.1 | MrfD protein | VFG0885 | Protein | 1e-51 | 50 |
