Gene Information

Name : S70_13005 (S70_13005)
Accession : YP_006217135.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : plasmid-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2792582 - 2793403 bp
Length : 822 bp
Strand : -
Note : -

DNA sequence :
ATGTCTCGTTTAGCTTCCCGTTTTGGCAATGCTTGCTCTATTCGTCGTGACCGCCCGCTAACTACCGAAGAGTTATTTCG
CACAGTACCTAGCGTATTTTCAGAAGAAAAACACGAATCCAGAAGTGAACGTTATACTTACATCCCGACCATTACCTTAT
TGGATAGTCTTCAAAAAGAAGGCTTCTATCCGTTCTTTGCTTGCCAAACGCGTGTGCGAGATGACAGCCGTCGTGATCAT
ACTAAGCATCTGTTACGGCTGAGACGCCATGACCAAATTACGGGCAGCCTAGTGCCTGAAATCATCTTACTCAATAGTCA
TGATGGCTCATCGAGTTATCAGATGTTACCGGGGATGTTCCGATTCGTTTGTCAGAATGGCTTAATTTGCGGACAAACCT
TTGGTGAGGTGCGTGTACCGCACAAGGGCGATGTGGTGGAAAAAGTGATTGAAGGGGCTTATGAAGTGTTAGGGCTATTT
GAACGCATGGATGAGCAACGTGATGCCATGCAATCCCTATTATTACCGCCACCAGCCCAACACATCTTTGCTCAATCTGC
TCTCACATATCGTTATGGTGAAGCGCATCAACCTGTGACCGAAGCGCAAGTATTACAGCCACGCCGTGTAGAAGATAAGA
AGGACGATCTTTGGACGGTGTACCAACGTTTGCAGGAAAATTTAATTAAAGGGGGATTATCAGGCAGAAATGCGAAAGGT
AAACGCGCTCGCACACGTTCAGTGAATGGGATTGATGGTGATGTGAAGCTTAACCGAGCCTTGTGGGTGATGGCTGAAAA
TATGCTTCAACTAGCCTCGTAA

Protein sequence :
MSRLASRFGNACSIRRDRPLTTEELFRTVPSVFSEEKHESRSERYTYIPTITLLDSLQKEGFYPFFACQTRVRDDSRRDH
TKHLLRLRRHDQITGSLVPEIILLNSHDGSSSYQMLPGMFRFVCQNGLICGQTFGEVRVPHKGDVVEKVIEGAYEVLGLF
ERMDEQRDAMQSLLLPPPAQHIFAQSALTYRYGEAHQPVTEAQVLQPRRVEDKKDDLWTVYQRLQENLIKGGLSGRNAKG
KRARTRSVNGIDGDVKLNRALWVMAENMLQLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-92 71
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-92 71
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-92 71
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-92 71
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 8e-93 71
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-92 71
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 8e-93 71
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-93 71
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 8e-93 71
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-93 71
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 4e-93 70
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-96 70
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 3e-92 70
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 4e-92 70
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-91 69
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-80 58
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 4e-81 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_13005 YP_006217135.1 plasmid-like protein VFG0658 Protein 8e-93 71
S70_13005 YP_006217135.1 plasmid-like protein VFG1526 Protein 2e-93 70
S70_13005 YP_006217135.1 plasmid-like protein VFG1676 Protein 2e-92 70
S70_13005 YP_006217135.1 plasmid-like protein VFG1615 Protein 6e-92 69