Gene Information

Name : S70_12925 (S70_12925)
Accession : YP_006217119.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : inositol phosphate phosphatase SopB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2780829 - 2782511 bp
Length : 1683 bp
Strand : +
Note : COG0488 ATPase components of ABC transporters with duplicated ATPase domains

DNA sequence :
GTGTTTTACATAATAAAGTCATATGAACCCCAACAATCAATTTCTCATGCCACATCCAGCGGGCAGGAGCAGTTAAGTAA
GACATTTGCTTATAATATTGATTCAGTTAACAACACAATAAAAAGCCAAAAGCTTGTTAGAGAGGCAATAAAAACACCAC
CTCGTGGTCAAAGTTCAGAGGAGAGAAAAAATAACCTCACTAACGTAACTCAAGATAAAAAAGATCTTATTCGTTTCCAG
CAGGAGCTGCTCAGTACTGCAGAAAATATATTGAAACACCTTGATTTATCCACGGAAGTGTTAGCTACAATATCGGATAA
ATTAAACCAGTTAACGAGTGAACCAAGCAGACTAATTCAATCAAGGGAATTGTTGCAGGCTAAAAAACTCGAAGAAAAAT
TAATTAAAATCATTCATCATGAAATGCTCAATAGTAATAATAGAATCTCTTTAAAAGATGTTGGGAAACTTTTTCAAAAA
GAGCTAAGTAGGCATCTTAATAATAAAGATTGGCATACAATAGAAACAGCATTGAGTTATGGAAATAGCGAATATTCATT
TATCTTAACTCCCGCATCTCAAATGAAATATTGTGGTGGCAATCACGAGATATTTTGTGACAACAGCTATAAAGGGAAAG
GTGTTTGTTCGAAATCAGCAGAAGAGACGACTCACGCTGTTAATTTATGGCTTTCAGAGGTTAAAGATAATAATCAATCC
ACTTTATTTAGTGGGATCCGCCACGGAGTATTATCGCCTTACGCCCTTCCTGAGCGCAGTGCCGCACGTCTACAAGGCGC
TAAAAATAGAGCAAAAGAGGTCGTGATGGCTGCGCTGTTTGCAAAGCCTGAATTGTATAAGAGAGCATTAAATCATGAAG
AGGTGACATTGCGGATCGCTTCAACCTCTTTACTAACATATTTAGGTAAAGAGAAAGGGATGCTTGATGATCAAGTTGCT
GCTTGGAAGATGTTAAATAACGATGGCGTTATCAAACTGAATATCAAAAATGAGAAAGGCGAAGCCCAAGAAGTTAAAGT
TAAACTGGATATTGCGATATTCAACTTTGGCGTTAATGAACTGGCATTTTCCATCCCGAAGGTGATCAGCCAAAATGATA
ATTTAAATAAAACCGCTTTAGCCCAAATATTAGGGTGTAACTATCTTATTAATAATGAAGTGGGGGGATGGGTAGGTCAC
TATTTATCTGAACATCCTCATGCTAGTAATAGGCATAAAGTAGAAGAGTTATGTCAGCAGATAAAGGAAATATGGAAGAA
AAAATCATATCGTTATGATGGTAATGAGCCTTATAAAATAGCACAACGTATCGCGATGTTAGCTTACGAAATTGGTGCAG
TGCCTTGCTGGAATTGCAAAAGTGGTAAAGATAGAACAGGTATGCTGGACGCAGAAATCAAGCGGGAAGCTATCAATTAT
CATCAAGGTTATAGTTTGAGTAAGCCAGGCGCTAAGTTGACGAATGAAGAGAAAAAATTATTCCAAGGTGTTTTGCTATA
TAGCGGTAACAAAGAAGTACAGGAATGCAATACTGGCGTTGCAGGTAATAAAGTCACCAAAGATCTACCATTCATGTTAA
GACCACTTGCATTATCTTATAAAACACGTATTGGTGATGAGGTTATTCGGCGACAGGTACAAGGGTTTTCATCTTTAGTT
TAA

Protein sequence :
MFYIIKSYEPQQSISHATSSGQEQLSKTFAYNIDSVNNTIKSQKLVREAIKTPPRGQSSEERKNNLTNVTQDKKDLIRFQ
QELLSTAENILKHLDLSTEVLATISDKLNQLTSEPSRLIQSRELLQAKKLEEKLIKIIHHEMLNSNNRISLKDVGKLFQK
ELSRHLNNKDWHTIETALSYGNSEYSFILTPASQMKYCGGNHEIFCDNSYKGKGVCSKSAEETTHAVNLWLSEVKDNNQS
TLFSGIRHGVLSPYALPERSAARLQGAKNRAKEVVMAALFAKPELYKRALNHEEVTLRIASTSLLTYLGKEKGMLDDQVA
AWKMLNNDGVIKLNIKNEKGEAQEVKVKLDIAIFNFGVNELAFSIPKVISQNDNLNKTALAQILGCNYLINNEVGGWVGH
YLSEHPHASNRHKVEELCQQIKEIWKKKSYRYDGNEPYKIAQRIAMLAYEIGAVPCWNCKSGKDRTGMLDAEIKREAINY
HQGYSLSKPGAKLTNEEKKLFQGVLLYSGNKEVQECNTGVAGNKVTKDLPFMLRPLALSYKTRIGDEVIRRQVQGFSSLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopB AAK27357.1 SopB Virulence SPI-5 Protein 8e-81 49
sopB AAK27355.1 SopB Virulence SPI-5 Protein 3e-81 49
sopB AAC33723.1 SopB Virulence SPI-5 Protein 2e-81 49
sopB YP_216030.1 outer protein Virulence SPI-5 Protein 2e-82 49
sopB NP_460064.1 secreted effector protein Virulence SPI-5 Protein 2e-82 49
sigD NP_455588.1 cell invasion protein Virulence SPI-5 Protein 1e-83 49
sopB AAK27356.1 SopB Virulence SPI-5 Protein 2e-84 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_12925 YP_006217119.1 inositol phosphate phosphatase SopB VFG0992 Protein 4e-80 49
S70_12925 YP_006217119.1 inositol phosphate phosphatase SopB VFG0465 Protein 9e-83 49