Gene Information

Name : S70_12435 (S70_12435)
Accession : YP_006217025.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Resistance
Product : transposon Tn10 tetD protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2672047 - 2672400 bp
Length : 354 bp
Strand : +
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence :
ATGAGTCATCACACCATTAGAGAAAATGTGATACAAGATATTCTTTTATGGATTGATATGAATGTGGATAAGCCACTGAA
TATTGCGGAAATCTCTCATAGGGCTGGCTATTCAAAATGGTATTTTCAACGTATTTTTAAAAATACCGTGGGCGTCAGCT
TAGGGCAATATCTTTTAATTAATAGGCTATTAAAGGTGTCATCTGATTTGAAACAGACAAATGACAAGATTATTGATATT
GCTTTTAGATACGGTTTTGATGGACAGCAAGGGTTAACAAGAGCTTTTAAGCGTAAATTGAAAGTAACCCCTGCTAAATA
TAGGAGAGAAACCGCACTCAGATACCATGCGTAG

Protein sequence :
MSHHTIRENVIQDILLWIDMNVDKPLNIAEISHRAGYSKWYFQRIFKNTVGVSLGQYLLINRLLKVSSDLKQTNDKIIDI
AFRYGFDGQQGLTRAFKRKLKVTPAKYRRETALRYHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 5e-24 47
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 5e-24 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_12435 YP_006217025.1 transposon Tn10 tetD protein CP000647.1.gene1624. Protein 2e-22 47
S70_12435 YP_006217025.1 transposon Tn10 tetD protein NC_010558.1.6276025. Protein 2e-24 47
S70_12435 YP_006217025.1 transposon Tn10 tetD protein CP001918.1.gene2033. Protein 3e-22 46
S70_12435 YP_006217025.1 transposon Tn10 tetD protein CP001138.1.gene612.p Protein 1e-21 45
S70_12435 YP_006217025.1 transposon Tn10 tetD protein NC_002695.1.917339.p Protein 3e-22 45
S70_12435 YP_006217025.1 transposon Tn10 tetD protein CP001138.1.gene1637. Protein 4e-22 45
S70_12435 YP_006217025.1 transposon Tn10 tetD protein BAC0560 Protein 3e-22 45
S70_12435 YP_006217025.1 transposon Tn10 tetD protein CP000034.1.gene1596. Protein 5e-22 45
S70_12435 YP_006217025.1 transposon Tn10 tetD protein BAC0371 Protein 3e-20 41
S70_12435 YP_006217025.1 transposon Tn10 tetD protein NC_002695.1.914293.p Protein 3e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_12435 YP_006217025.1 transposon Tn10 tetD protein VFG1038 Protein 2e-24 47