Gene Information

Name : S70_09860 (S70_09860)
Accession : YP_006216523.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2110913 - 2111674 bp
Length : 762 bp
Strand : +
Note : COG4669 Type III secretory pathway, lipoprotein EscJ

DNA sequence :
ATGAATACATTGAAGAAATTAATCCTAATTACCTTCGTCGGGTTATTGGCTGGGTGTGATAACCAACTCTTACTCAGTCA
TCTTAGCCAACGCCAGAGCAATGAAGTCCTAGCCATCTTACAAGAGCATGGCGTTGAAGCTTCACGTAAACAAGATAATA
AACAAGGGGATTCTATAAAGGTATCGCCGCGTGACTTTGTGATCGCCGTAGATTTATTACGTCAATATAACTTACCGTCT
AAAGACCCTGTGGAGATCATTCAGGCTTTCCCGGGAGACTCGCTGGTTGCTTCACCACAGGCGGAACGCACTCGACTGCT
CTCCTTGATTGAACAACGCTTAGAGCAATCTCTATTAACGATCCCTGATGTTGTTAATGCGAGGGTGCATGTCAGTTACC
CTCTGAATGGTAATACCCCGACTAAGCAGACGCAAAAAGTGTCTAGTTTAGTGACCTACTCTGGTAATGAAGACCCGAAA
TTGATGATGAATAAAATCAAACTATTCCTAACCAGTAGCTTTGCAGAAACCAATTATGACAATGTTTCTGTGGTGATTGT
CAGCCGCCCACCTTTACAGCATCAAATTCGCACTGAACCTGAATCAATATTTAATCCTATTTGGGTTGCCATACTGACGC
TCGGGGGAGCCGCTGTTCTTGGCCTAGCCATATTCCTTTGGCACCGCCAGCAATCATTGAAAAATAGAGATGATCAAGAC
AAGGCCGCTATAGAGGCAAAAATCGATGACACTATTGCATAA

Protein sequence :
MNTLKKLILITFVGLLAGCDNQLLLSHLSQRQSNEVLAILQEHGVEASRKQDNKQGDSIKVSPRDFVIAVDLLRQYNLPS
KDPVEIIQAFPGDSLVASPQAERTRLLSLIEQRLEQSLLTIPDVVNARVHVSYPLNGNTPTKQTQKVSSLVTYSGNEDPK
LMMNKIKLFLTSSFAETNYDNVSVVIVSRPPLQHQIRTEPESIFNPIWVAILTLGGAAVLGLAIFLWHRQQSLKNRDDQD
KAAIEAKIDDTIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaJ AAS66833.1 YsaJ Not tested SSR-1 Protein 1e-37 46
ECs3716 NP_311743.1 EprK Not tested LIM Protein 9e-32 46
prgK AAS66872.1 PrgK Virulence SSR-2 Protein 3e-34 46
prgK NP_461792.1 needle complex inner membrane lipoprotein Virulence SPI-1 Protein 9e-31 45
prgK NP_457265.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 9e-31 45
prgK NP_806474.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 9e-31 45
prgK YP_217790.1 cell invasion protein Virulence SPI-1 Protein 9e-31 45
eprK AAZ31284.1 EprK Virulence ETT2 Protein 3e-30 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_09860 YP_006216523.1 type III secretion system apparatus lipoprotein VFG1787 Protein 8e-66 63
S70_09860 YP_006216523.1 type III secretion system apparatus lipoprotein VFG0533 Protein 4e-31 45