|
Name : S70_08135 (S70_08135) Accession : YP_006216182.1 Strain : Providencia stuartii MRSN 2154 Genome accession: NC_017731 Putative virulence/resistance : Virulence Product : fimbrial outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 1723181 - 1725685 bp Length : 2505 bp Strand : - Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGGTGTTTAAACATAGCAAACTACGGCGGGTTATTTTATTGGCGTTTGGCCTGACGACATGGGGCGCGAGTGCTGCTGA ATTCAATACTGATGTGCTGGATGCAGAAGATCTGCAAAATATCGATATAAGCCGATTCTCTGTCGCCGGATATGTACCGC CGGGAGATTATGTTTTAACTGTGTGGGTTAATGGGCTGCGCTTAGGCGCCCCACGTGATATTTCCGTATATGAGAAAAGC CCTTCTGCCGAGCAACGCTCTCCGTTTGTTTGTATACCAACAGATATGCTGCAATTAATAGGATTGACGCATTCTGCAAA GCGCAAATTAACCACGTTAAACGAAGGGCGATGCCTAGATTTATCATTGTTATCCGGGGCACAAACTCAAGTTGAGCTAT CAACATTATCATTAAAAATAACTATCCCTCAAATGTGGATGGAGTACAGAGATCCCTACTGGATACCGCCAGCATTATGG GAGGAAGGTGTAAACGGGGGATTTATTGATTTCAATGCGAACGCGTCAGCAACAAAAGAAAAAGGCGGCACTAAACGAGT TTATTTATCAACCAATGGAACGATGGGGATAAATACCGGCGCTTGGCGCTTTCGCGGGGATTATAATGGAAGCTACCAAA AACAGCGTGGAGGATACTCGCCACAAGAAACACATCAGTTTGATTTCAGCCGGTTATATGCATTCACTTCATTAACAGAG TCAGCCGCTATTTTGACGTTAGGCGAGAATTATTTTTATTCTGATATTTTTGACGCTTGGCAATATAGCGGGGTGTCGTT AGAAAGTGACGATAGAATGCTCCCTCCCAAGCTGGTTGGTTATGCGCCTGAAATTATCGGCGTAGCCAATACCAATGCGA CGGTGATCGTCCGTAGCCAAGATAGGGTTATCTCTGAAACGCTTGTTCCACCAGGGCCTTTTCGTATTCAAACATTAGAG AGTGGGATTCGAGGTATATTGGATGTCACCGTGAGAGAAGAAAATGGTGAAGAGAAGACATTTACGGTTAGCACAGCGTC ACTGCCTTATTTAACGCGACCGGGACGCCTTATTTATAAGTTAGTCGGTGGAAAAACGCGTTATGATAGCCATCATCTTA CAGGTAAGCCCGTTATTGGTGGCGAGTTTTCCTATGGCGTCTCTAATGCTTGGTCATTGTACGGAGGCTCTCAGTTAAAT GGTTATTATCAGGCGCTAGCGGTAGGTTTAGGGCGTGATCTTTTTTCCATTGGCGCTATTTCCGTTGATATCACTCAGTC CTTTGCTGATCTTGAAGATAAGAAGCGACGAGGGCGCTCTTATCGAGTCAACTATGCTAAATCCTTTGATGATTTGCGTA CGGATATTACATTTGCAGGCTACCGTTTTGCCGATAAAGACTACCGGACGTTGACACAATTTTCTGATGAGGCGCGTACA GGTATTACCCCCTATGCGCCGAAAACGAATTATCAAATTTACCTGAATAAGTACTTTGAACACTTTAATATTTCCTTAAA TTATCAATACAGTACTTATTGGCAAAACGATCCTCAAACACAATATGGGATGTATGCAAGTACCCATCTCAACTTGCCAG CCTTATCTCAACATGGGGCGAGTTTATCGCTGTCTGCTACGCGAACAGAGCGGGATAATGGTTTTGAAGATGATGCAATT AATCTATACCTAACGGTTCCTCTTTATACAGGGCATAGCTTAACGTTTTCAGAGCTTTACTCTCGCTCATCCGGTCATAA TCAATTCAATCACAACGTGGGTTATAGCGGCTACAACACGACCGATAATTACAGCTTAAATATGGGTTATCACCATGGCC AAAACATGGATAACCAAACCAGCCTTAGTGGTTTCTATTCTCGAGACTTATCGCAAGCGAATATCTCAGCAAATGCCAGC TATGTACCGCATGAATATCGTAGTGTGGGAGCCTCCATAAACAGTGGAATAACCGCGACCGCTAAAGGTGTTGCATTACA TCGTTCAGCAAATGGTGACACGCGATTAATGATAGATACGTCGGGGATCAGCGGCGTGCCTTTAGATAATGGCGTGATCA AAACCAACGCTTTTGGGTTAGCGGTGATCCCAAATGTGAATAGCTATCGTAAGTCTACTGCATCCATTAATACCAGCAAA TTACCCGATAATTTAGAGACGTTAACGTCGACAACCGATATTACGCTTACTAAAGGAGCGATTGGTTATCGCCATTTAAC GGTGATGAAGGGAGAAAAACTCTTTGCCATTTTGTCATTAGAGAACGGCAAGAAACCGCCTTTTGGTGCCAGTGTACGCA ATGCTGATAATCGTGAATTAGGTATTGTCGGGGAAGATGGAGTGACTTGGTTAGTGGGCGTTTCGGCACAAGAGTCGTTA TTTGTTTATTGGGATAACCAAAAGCAATGCAGGATCAAATTGCCAGAGACGTTTGTTGTGTCGTCGGACATGTTGTTACT GCCATGCCTACGGGGGAAGTTGTAG Protein sequence : MVFKHSKLRRVILLAFGLTTWGASAAEFNTDVLDAEDLQNIDISRFSVAGYVPPGDYVLTVWVNGLRLGAPRDISVYEKS PSAEQRSPFVCIPTDMLQLIGLTHSAKRKLTTLNEGRCLDLSLLSGAQTQVELSTLSLKITIPQMWMEYRDPYWIPPALW EEGVNGGFIDFNANASATKEKGGTKRVYLSTNGTMGINTGAWRFRGDYNGSYQKQRGGYSPQETHQFDFSRLYAFTSLTE SAAILTLGENYFYSDIFDAWQYSGVSLESDDRMLPPKLVGYAPEIIGVANTNATVIVRSQDRVISETLVPPGPFRIQTLE SGIRGILDVTVREENGEEKTFTVSTASLPYLTRPGRLIYKLVGGKTRYDSHHLTGKPVIGGEFSYGVSNAWSLYGGSQLN GYYQALAVGLGRDLFSIGAISVDITQSFADLEDKKRRGRSYRVNYAKSFDDLRTDITFAGYRFADKDYRTLTQFSDEART GITPYAPKTNYQIYLNKYFEHFNISLNYQYSTYWQNDPQTQYGMYASTHLNLPALSQHGASLSLSATRTERDNGFEDDAI NLYLTVPLYTGHSLTFSELYSRSSGHNQFNHNVGYSGYNTTDNYSLNMGYHHGQNMDNQTSLSGFYSRDLSQANISANAS YVPHEYRSVGASINSGITATAKGVALHRSANGDTRLMIDTSGISGVPLDNGVIKTNAFGLAVIPNVNSYRKSTASINTSK LPDNLETLTSTTDITLTKGAIGYRHLTVMKGEKLFAILSLENGKKPPFGASVRNADNRELGIVGEDGVTWLVGVSAQESL FVYWDNQKQCRIKLPETFVVSSDMLLLPCLRGKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 1e-146 | 43 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-145 | 43 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 3e-145 | 43 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 2e-146 | 43 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 1e-146 | 43 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 1e-146 | 43 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 1e-142 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S70_08135 | YP_006216182.1 | fimbrial outer membrane usher protein | VFG1548 | Protein | 7e-147 | 43 |
| S70_08135 | YP_006216182.1 | fimbrial outer membrane usher protein | VFG0884 | Protein | 7e-147 | 43 |
| S70_08135 | YP_006216182.1 | fimbrial outer membrane usher protein | VFG0895 | Protein | 5e-147 | 43 |
