Gene Information

Name : S70_07890 (S70_07890)
Accession : YP_006216137.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1672642 - 1673049 bp
Length : 408 bp
Strand : +
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence : 
ATGTATAATAAATTACCCATTTCATATAGCAGAAAACATACTCAATTTCAGTCCTCTATTATCTCTGAAATCCTAGTTTG
GATAGAAGGAAACCTTACTAATCGATTATCATTAGATGATATTGCACAACATTCTGGATATACCAAATGGCACTTGCAAC
GGGTATTTCGTAAAATTGTCGGTATGCCTTTAGGGGAATATATACGCCGTCGACGGATCTGTGAAGCGGCGAAAGAGCTA
CAAACCACAAACCTTCAAGTAATTGATATTGCATTGAAATACCAATTTGACTCCCAACAATCCTTTGCCAAAAGGTTTAA
AGCTTATTTAGGTATTTCACCTTCTTTATATCGTCTTTCCGACACTGGTTATAATGACCTCTTGTTACTAGAGCCTAAGG
TCGCTTAA

Protein sequence : 
MYNKLPISYSRKHTQFQSSIISEILVWIEGNLTNRLSLDDIAQHSGYTKWHLQRVFRKIVGMPLGEYIRRRRICEAAKEL
QTTNLQVIDIALKYQFDSQQSFAKRFKAYLGISPSLYRLSDTGYNDLLLLEPKVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 3e-26 50
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 3e-26 50
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 1e-16 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_07890 YP_006216137.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 1e-26 50
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 2e-21 46
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 3e-17 43
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 9e-23 43
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 3e-23 43
S70_07890 YP_006216137.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 2e-23 43
S70_07890 YP_006216137.1 AraC family transcriptional regulator BAC0560 Protein 2e-23 43
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 3e-23 43
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 2e-23 43
S70_07890 YP_006216137.1 AraC family transcriptional regulator BAC0371 Protein 7e-18 42
S70_07890 YP_006216137.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 7e-18 42
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 1e-17 42
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 4e-17 41
S70_07890 YP_006216137.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 3e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_07890 YP_006216137.1 AraC family transcriptional regulator VFG1038 Protein 1e-26 50
S70_07890 YP_006216137.1 AraC family transcriptional regulator VFG0585 Protein 3e-17 43