Gene Information

Name : S70_07575 (S70_07575)
Accession : YP_006216075.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : Chaperone protein PapD precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1592854 - 1593561 bp
Length : 708 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence :
ATGAAATATAAGTTATTGTTAATTCCACTATTATTTATAGCACATAACAGCATGGCCGCGGTTTCTCTTGATAGAACAAG
AGCGATAGTAGAAGGGAGCTCTAATCCAGTTATTATTAATATTGAGAATCAAAGTGATACTTTGCCCTATTTAGCTCAGG
CTTGGATTGATGATAAAGATGGTAATAAATTAACAACAGGGCCGTTAATTGCAACACCATTGGTTCAACGTTTGGAACCA
AACGTAAAAAGTATGATTCGAATCTCGACGACGGATGTATCTCAGTTACCGAAAGATAGAGAGTCTGTTTATTACTTTAA
TTTAAGAGAGATCCCGCCTAAAAGTGATAAACCGATTGTTATGCAGGTCGCATTACAGTCAAGAATTAAATTATTCTATC
GCCCAGAGGCGATTTTAGATAAGGCAAAAACCAATTGGGCTTTAGATTTAGAATTACAATCTGTCAGTAATGGTTATGTG
GTTAAAAATACATCACCTTTTTATTTGACCGTGATAGGCTTAGCCGGTGATAGAAATAAGTCAGAAAATGGTGCCTTTGA
TTCGTTTATGATCGAACCTTTTGGTTCTTATCAAGTCAAGACTGCTCATTTTCAAAAGCCTTATCTTACTTATATTAACG
ACTATGGCGGAAGGCCAACAGTTTCATTTAACTGTGATGCATCCGTCTGTAAAGCAGATAAACAATAA

Protein sequence :
MKYKLLLIPLLFIAHNSMAAVSLDRTRAIVEGSSNPVIINIENQSDTLPYLAQAWIDDKDGNKLTTGPLIATPLVQRLEP
NVKSMIRISTTDVSQLPKDRESVYYFNLREIPPKSDKPIVMQVALQSRIKLFYRPEAILDKAKTNWALDLELQSVSNGYV
VKNTSPFYLTVIGLAGDRNKSENGAFDSFMIEPFGSYQVKTAHFQKPYLTYINDYGGRPTVSFNCDASVCKADKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-56 53
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-64 53
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 5e-64 53
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 3e-64 53
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 6e-64 53
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 6e-64 53
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 4e-64 53
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 9e-62 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_07575 YP_006216075.1 Chaperone protein PapD precursor VFG0885 Protein 8e-57 53
S70_07575 YP_006216075.1 Chaperone protein PapD precursor VFG1547 Protein 1e-64 53
S70_07575 YP_006216075.1 Chaperone protein PapD precursor VFG0896 Protein 3e-64 53