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Name : S70_06650 (S70_06650) Accession : YP_006215892.1 Strain : Providencia stuartii MRSN 2154 Genome accession: NC_017731 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 1383282 - 1385816 bp Length : 2535 bp Strand : - Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGTCTTCTTCACGACCTGTATTTTTTCGCCTTAGTTGCTTAGGCCTAGCCATTGTTTTTTCATTCTATGGTCTATCAAC GCCATTGTGGGCAACTGAGACAATTGAATTCAATACGGATGTGCTAGATCTAGAAGATAAAAATAACATCGATCTAGAGC AGTTCTCTCGTGCGGGTTACATCATGCCGGGGACCTATTCTTTAACATTAAAGGTAAATGGCGAGCAGTTTTCAGAAGTG TCAGTGCCTTTTTATCCCCCTGAAGATGATCCACAAGGTAGCACAGCTTGTATATCGCCAGAGGTAGCGGATCAATTTGG ATTGACTTCATCGGCAAAAAAAGAGTTGGCATGGTGGCATGACGGACAGTGTCTGACAGCAAGTAGTTTACCAGGGATGC AAATCCATGGTGATTTAGCTACCTCGTCATTATACGTGAGTATCCCACAAGCTTATCTCGAATTCACTGCGCCTAACTGG GATCCACCATCGCGTTGGGATGAGGGAATTGCTGCGTTGATGCTGGACTATAACATTAATGGTAATGCCAATAATTCATA TAACGGTGGTCACGATAGTTATGCGTTAAATGGAAATGGTATTGTAGGGGTGAACTTAGGGGCTTGGCGCTTTCGCGCTG ATTGGCAAGGTCGTTTAAATCATGCTACTGGTTCTGGTGATTCGGTTAATAAAGACTTTGACTGGAATCGGTTTTATGCC TATCGCGCATTGCCGTCACTCGCTGCTAAATTGGTATTAGGGGAGGATTACCTCGTTTCTAATATCTTTGATTCATTTCG TTTTATTGGCGCCAGTGTGCGTTCTGAATTGAATATGCTCCCGCCAAATTTGCGTGGTTATGCACCAGAAGTGACAGGTA TCGCAAAAACAAATGCGACGGTAATAGTTAGCCAGCAAGGGCGAGTGTTGTACGAAACACAAGTCGCTCCAGGGCCGTTT CGTATTCAGGATTTGAGTGATGCTGTTAGTGGCAAACTCGATATCACAGTTAAAGAACAAGATGGTACAACTCAAGACTT TCAAATAGATACAGCTAGCTTGCCTTATTTAACGCGTCCGGGGCAAATGCAATACAAATTAGCATTAGGCCAGCCAACTA ATTATCAGCGTCACAGTGAAGGGGATTCTTTTGTCACGGGTGAATTTTCGTGGGGAGTCAACAACGGCTGGTCACTATTT GGCGGTAGCCTGAATAGTAAAAATTACAATGCCGTATCGCTGGGTATTGGGCGTGATTTATTGGCATTTGGAGCTTTATC TTTCGATGTTACTCAATCTTTTGCTCGATTACCAAATATGGGGAATTTAAGCGGAGGTTCTTACCGTATTAATTACTCTA AACGTTTTGAGGCGATTGATAGCACTATTCAATTTGCAGGTTATCGCTTTTCCGAGCGTGACTTTATGTCGATGTCTGAT TTCTTAAATGCACTGAAAACCGGTGAGCGTTATGGAGGGAGTAAAGAGTTATATACGATATCGCTGAATAAAAATTTCGG CGAGTTAGGAATGTCGTTATACCTCAACTATAACCACCAAACTTATTGGGATCAGCCGGATAATGATTATTACAGCATTA TGCTGTCGAAATATATGGATATTGGTTCACTCAAAAATATCAGTGTTAACTTATCGGCAAACCGCAGTGTTTATAATGGT GTCAAGGATGACAGTATATATCTATCGACCTCATTCCCCTTAAGTAACGGCGCCAACGTAGGGTATTCGCTGAATAGTAG TCGCTACGATACGACAAATCGGGCGACCTATTACGACCGAATCAATGATCGAACGACATACCAGTTGAGTGCCGGGAGTA GCAAAAAAGGAGGAACGGGAAGTGCATTTATCACCCATCAAGCTGATATCGCACGTTTAACGGCTAATGTGAGTTATATG CATAACCAATATAGTGCATTTGGTCTATCAATGAGCGGTGGAATGACTTTTACCCCAGAGGGAGGCGGACTTCATCGTGT TAATACATTAGGAGGAACGCGAATGTTAGTCGATACCGATGGTGTTTCGGATGTACCGATCAAAGGGATAGGTGCACCGA TCACCTCGAATATGTTTGGTAAAGCCATTGTTGGTGATGTGAGTAGTTACTACCGTAGTAAGGCTCAAATTGACTTAAAT GCATTACCAGACAATGTAGAAGCACAGCAGTCGGTAGTACAAGCCACGCTCACAGAAGGCGCTGTAGGTTATCGTCATTT TGCTGTGGTATCAGGACAAAAAGCGATGACAGTACTGCGATTGCCTGATGGTAGCCACCCGCCATTCGGCGCTCAAATAC AAAACAGTAAAGCGCAAAATACAGGAATTGTGGGTGATTCTGGAAGTGCTTATATCAGTGGTATTAACCCTCAGAGTGTG ATGACTGTGACTTGGGGAGAAGATAAGGCTTGTCAGATCACCTTTCCTATTCAGTTAGGTTCTTTACAGGAAGCATTACT ATTGCCGTGTATTCCGACAACGTTACCTGCATCAACGGTGATAGTGAAAAGATAG Protein sequence : MSSSRPVFFRLSCLGLAIVFSFYGLSTPLWATETIEFNTDVLDLEDKNNIDLEQFSRAGYIMPGTYSLTLKVNGEQFSEV SVPFYPPEDDPQGSTACISPEVADQFGLTSSAKKELAWWHDGQCLTASSLPGMQIHGDLATSSLYVSIPQAYLEFTAPNW DPPSRWDEGIAALMLDYNINGNANNSYNGGHDSYALNGNGIVGVNLGAWRFRADWQGRLNHATGSGDSVNKDFDWNRFYA YRALPSLAAKLVLGEDYLVSNIFDSFRFIGASVRSELNMLPPNLRGYAPEVTGIAKTNATVIVSQQGRVLYETQVAPGPF RIQDLSDAVSGKLDITVKEQDGTTQDFQIDTASLPYLTRPGQMQYKLALGQPTNYQRHSEGDSFVTGEFSWGVNNGWSLF GGSLNSKNYNAVSLGIGRDLLAFGALSFDVTQSFARLPNMGNLSGGSYRINYSKRFEAIDSTIQFAGYRFSERDFMSMSD FLNALKTGERYGGSKELYTISLNKNFGELGMSLYLNYNHQTYWDQPDNDYYSIMLSKYMDIGSLKNISVNLSANRSVYNG VKDDSIYLSTSFPLSNGANVGYSLNSSRYDTTNRATYYDRINDRTTYQLSAGSSKKGGTGSAFITHQADIARLTANVSYM HNQYSAFGLSMSGGMTFTPEGGGLHRVNTLGGTRMLVDTDGVSDVPIKGIGAPITSNMFGKAIVGDVSSYYRSKAQIDLN ALPDNVEAQQSVVQATLTEGAVGYRHFAVVSGQKAMTVLRLPDGSHPPFGAQIQNSKAQNTGIVGDSGSAYISGINPQSV MTVTWGEDKACQITFPIQLGSLQEALLLPCIPTTLPASTVIVKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 2e-171 | 46 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-164 | 45 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 6e-163 | 45 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 8e-163 | 45 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 3e-164 | 45 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 2e-164 | 45 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 2e-164 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S70_06650 | YP_006215892.1 | fimbrial biogenesis outer membrane usher protein | VFG1548 | Protein | 1e-164 | 45 |
| S70_06650 | YP_006215892.1 | fimbrial biogenesis outer membrane usher protein | VFG0884 | Protein | 1e-164 | 45 |
| S70_06650 | YP_006215892.1 | fimbrial biogenesis outer membrane usher protein | VFG0895 | Protein | 1e-164 | 45 |
