Gene Information

Name : S70_06325 (S70_06325)
Accession : YP_006215827.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : CP4-57 prophage, putative DNA repair protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1310042 - 1310524 bp
Length : 483 bp
Strand : +
Note : COG2003 DNA repair proteins

DNA sequence : 
ATGGAGAGTATCAATACTTATACGAATACCTTAACACTGCTTCCTAATGAACAACGTACTATCAAACGTGCGTTGACCAT
ACTGGATAAGTATCTGCGTGAACCGGGTATTGCTTTTACATCAACGCAAAATGTGAGGGATTGGTTACGGCTAAAAATGT
CAGCATTAGAGCGTGAAGCGTTTATTGTGCTCTACTTGAATCAACAAAATCAGTTGATAAGCAGTGAAACCCTGTTTGCT
GGCTCGATTAGCAGCACACAGGTTTATCCTCGTGAAGTCGTCAAACGAGCACTTCATTTTAATGCTGCTGCCGTTATCTT
TGCACACAACCATCCGTCAGGCGATATCACGCCAAGCCAAGCGGATAAATCTATCACGCAACAATTAATAAAAGCATTGC
AGCTAATTGAAGTACGAGTACTTGACCATCTGATCATCGGTGGTCAGCAAATCTTCTCTTTCGCTGAGCATGGCTTAGTA
TGA

Protein sequence : 
MESINTYTNTLTLLPNEQRTIKRALTILDKYLREPGIAFTSTQNVRDWLRLKMSALEREAFIVLYLNQQNQLISSETLFA
GSISSTQVYPREVVKRALHFNAAAVIFAHNHPSGDITPSQADKSITQQLIKALQLIEVRVLDHLIIGGQQIFSFAEHGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 2e-44 65
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 3e-44 64
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 6e-44 64
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 3e-44 64
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 4e-44 64
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 4e-44 64
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 3e-44 64
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 1e-44 64
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 3e-44 64
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 1e-44 64
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 2e-44 64
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 2e-44 64
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 1e-44 64
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 3e-44 64
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 3e-44 64
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-44 64
unnamed AAL08475.1 unknown Not tested SRL Protein 2e-44 64
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 2e-44 64
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 1e-42 63
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 3e-27 53
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 3e-29 52
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 3e-29 52
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-29 52
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 1e-28 49
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 1e-25 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_06325 YP_006215827.1 CP4-57 prophage, putative DNA repair protein VFG1528 Protein 1e-44 64
S70_06325 YP_006215827.1 CP4-57 prophage, putative DNA repair protein VFG1678 Protein 5e-45 64
S70_06325 YP_006215827.1 CP4-57 prophage, putative DNA repair protein VFG1617 Protein 1e-44 64
S70_06325 YP_006215827.1 CP4-57 prophage, putative DNA repair protein VFG1066 Protein 1e-44 64
S70_06325 YP_006215827.1 CP4-57 prophage, putative DNA repair protein VFG0660 Protein 9e-45 64
S70_06325 YP_006215827.1 CP4-57 prophage, putative DNA repair protein VFG1119 Protein 9e-30 52