Gene Information

Name : S70_05465 (S70_05465)
Accession : YP_006215660.1
Strain : Providencia stuartii MRSN 2154
Genome accession: NC_017731
Putative virulence/resistance : Virulence
Product : tetracycline repressor protein TetR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1136522 - 1137148 bp
Length : 627 bp
Strand : +
Note : COG1309 Transcriptional regulator

DNA sequence :
ATGATGTCTAGATTAGATAAAAGTAAAGTGATTAACAGCGCATTAGAGCTGCTTAATGAGGTCGGAATCGAAGGTTTAAC
AACCCGTAAACTCGCCCAAAAGCTAGGTGTGGAGCAGCCTACATTGTATTGGCATGTAAAAAATAAGCGGGCTTTGCTCG
ACGCCTTAGCCATTGAGATGTTAGATAGGCACCATACTCACTTTTGCCCTTTAGAAGGGGAAAGCTGGCAAGATTTTTTA
CGTAATAACGCTAAAAGTTTTAGATGTGCTTTACTAAGTCATCGCGATGGAGCAAAAGTACATTTAGGTACACGGCCTAC
AGAAAAACAGTATGAAACTCTCGAAAATCAATTAGCCTTTTTATGCCAACAAGGTTTTTCACTAGAGAATGCATTATATG
CACTCAGCGCTGTGGGGCATTTTACTTTAGGTTGCGTATTGGAAGATCAAGAGCATCAAGTCGCTAAAGAAGAAAGGGAA
ACACCTACTACTGATAGTATGCCGCCATTATTACGACAAGCTATCGAATTATTTGATCACCAAGGTGCAGAGCCAGCCTT
CTTATTCGGCCTTGAATTGATCATATGCGGATTAGAAAAACAACTTAAATGTGAAAGTGGGTCTTAA

Protein sequence :
MMSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWHVKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFL
RNNAKSFRCALLSHRDGAKVHLGTRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERE
TPTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetR AFV47970.1 repressor protein TetR Not tested AbaR25 Protein 1e-94 100
ABZJ_00261 YP_005524217.1 tetracycline repressor protein TetR Not tested AbaR22 Protein 2e-94 100
tetR AFV47998.1 repressor protein TetR Not tested delta-AbaR25 Protein 1e-94 100
tetR YP_005797161.1 tetracycline repressor protein class G Not tested AbaR4e Protein 2e-94 100
tetR(B) AEQ20906.1 tetracycline repressor protein Not tested Tn6166 Protein 2e-94 100
tetR(B) AEZ06046.1 repressor protein Not tested Tn6167 Protein 2e-94 100
tetR AEA34668.1 tetracycline repressor protein Not tested Not named Protein 5e-94 100
BJAB07104_00278 YP_008207743.1 Transcriptional regulator Not tested AbaR25 Protein 8e-94 100
tetR AFH57203.1 repression protein Not tested AbaR4a Protein 1e-94 100
BJAB0868_00282 YP_008211608.1 Transcriptional regulator Not tested AbaR26 Protein 8e-94 100
tetR AAL08444.1 tet repressor Not tested SRL Protein 1e-90 99
tetR1 YP_005176239.1 tetracycline repressor protein Not tested ICEPmu1 Protein 2e-64 66
tetR2 YP_005176247.1 tetracycline repressor protein Not tested ICEPmu1 Protein 2e-64 66
tetR(A) ACK44536.1 TetR(A) Not tested SGI1 Protein 3e-51 53
tetR(A) AGK07026.1 TetR(A) Not tested SGI1 Protein 3e-51 53
tetR YP_006098395.1 tetracycline repressor Not tested Tn2411 Protein 4e-51 53
tetR(A) AGK07084.1 TetR(A) Not tested SGI1 Protein 3e-51 53
tetR(A) ACN81010.1 repressor protein Not tested AbaR5 Protein 3e-51 53
tetR CAJ77065.1 Tetracycline repressor protein Not tested AbaR1 Protein 2e-51 53
tetR(G) AGK07103.1 TetR(G) Not tested SGI1 Protein 1e-45 49
tetR AAK02050.1 tetracycline resistance regulator protein Not tested SGI1 Protein 1e-45 49
tetR ABZ01841.1 TetR Not tested SGI2 Protein 1e-45 49
tetR CAJ77033.1 Tetracycline repressor protein Not tested AbaR1 Protein 1e-45 49
tetR(G) AGK06973.1 TetR(G) Not tested SGI1 Protein 1e-45 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S70_05465 YP_006215660.1 tetracycline repressor protein TetR VFG1035 Protein 5e-91 99